Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_C02
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   1.5  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   2.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.6  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 197 SYQQLRQIFAEFEALSGKDIEES--IKKEFSGSVEKGMLAIVKCVKSKVGF 343
           S  +LR+I +     +G D++++  +KK      ++ +   V C+  KVGF
Sbjct: 22  SINKLRKIESVCAEENGIDLKKADDVKKGIFDKNDEKLACYVDCMLKKVGF 72


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = -2

Query: 415 DDDSDKGLIICAQTFHGVVESLSEETDLALNAFHNSKHAFLDTSREFF 272
           DD + K  + C  T HG+++  + E D+   A  +   +  D++++ F
Sbjct: 51  DDQNLKCYLKCFMTKHGILDK-NAEVDVQ-KALRHLPRSMQDSTKKLF 96


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 368 MKGLGTNDKTLIRIVVRRSEID 433
           + G+   D+ + + +VRRSE D
Sbjct: 386 LNGINREDRGMYQCIVRRSEGD 407


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 368 MKGLGTNDKTLIRIVVRRSEID 433
           + G+   D+ + + +VRRSE D
Sbjct: 386 LNGINREDRGMYQCIVRRSEGD 407


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,076
Number of Sequences: 438
Number of extensions: 1806
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)