Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_C01
(460 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 226 2e-58
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 221 6e-57
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 194 8e-49
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 149 4e-35
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 138 7e-32
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 132 3e-30
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 125 5e-28
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 98 7e-20
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 97 2e-19
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 93 3e-18
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 87 2e-16
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 84 2e-15
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 81 1e-14
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 80 2e-14
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 78 8e-14
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 77 1e-13
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 77 1e-13
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 77 2e-13
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 73 3e-12
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 2e-11
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 68 9e-11
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 68 9e-11
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 62 7e-09
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 61 1e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 2e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 2e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 2e-08
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 60 2e-08
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 60 3e-08
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 59 4e-08
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 59 4e-08
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 59 4e-08
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 57 2e-07
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 56 5e-07
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 54 1e-06
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 53 3e-06
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 52 6e-06
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 50 2e-05
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 49 4e-05
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 49 6e-05
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 48 1e-04
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 47 2e-04
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 47 2e-04
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 47 2e-04
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 46 3e-04
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 46 5e-04
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 45 7e-04
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 44 0.001
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 44 0.001
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 44 0.002
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 44 0.002
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 44 0.002
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 40 0.020
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.020
UniRef50_UPI000150A24A Cluster: hypothetical protein TTHERM_0050... 34 1.3
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 34 1.3
UniRef50_A1FL24 Cluster: ABC-2 type transporter; n=1; Pseudomona... 33 2.2
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 33 3.0
UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole... 33 3.9
UniRef50_UPI00005874CE Cluster: PREDICTED: similar to OTTHUMP000... 32 5.2
UniRef50_A6C829 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A3TZF9 Cluster: Acyl-CoA synthase; n=1; Oceanicola bats... 31 9.0
UniRef50_Q8IDM7 Cluster: DNA topoisomerase III, putative; n=2; P... 31 9.0
UniRef50_Q5BC61 Cluster: Putative uncharacterized protein; n=2; ... 31 9.0
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 226 bits (552), Expect = 2e-58
Identities = 104/132 (78%), Positives = 117/132 (88%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 424
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 425 VVIPAHNTGLGP 460
V +PA NTGLGP
Sbjct: 121 VTVPAQNTGLGP 132
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 221 bits (540), Expect = 6e-57
Identities = 102/132 (77%), Positives = 116/132 (87%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 245 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 424
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL +VRD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 425 VVIPAHNTGLGP 460
V +PA NTGLGP
Sbjct: 121 VTVPAQNTGLGP 132
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 194 bits (473), Expect = 8e-49
Identities = 85/132 (64%), Positives = 108/132 (81%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 244
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 245 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 424
+RKA++ HLE NP LEK+LPH+KGN+GFVFT D+VD+R+ +L N+V APA+ GAIAP+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 425 VVIPAHNTGLGP 460
V +PA NTGLGP
Sbjct: 121 VFVPASNTGLGP 132
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 149 bits (360), Expect = 4e-35
Identities = 71/132 (53%), Positives = 92/132 (69%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 244
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 245 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 424
+RKAIK+ ET P LE+LLPHIKGNVGF+FT+GDL ++ KL E K +PA+ G IAP
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPND 127
Query: 425 VVIPAHNTGLGP 460
V++PA +TGL P
Sbjct: 128 VIVPAGDTGLDP 139
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 138 bits (333), Expect = 7e-32
Identities = 68/134 (50%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 244
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 245 MRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 418
M+++++ H E N A+ LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 419 LSVVIPAHNTGLGP 460
+ VV+ NTGL P
Sbjct: 121 IDVVVQPGNTGLDP 134
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 132 bits (320), Expect = 3e-30
Identities = 66/129 (51%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Frame = +2
Query: 80 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 259
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 260 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 433
+ H + N A LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 434 PAHNTGLGP 460
NTGL P
Sbjct: 127 QPGNTGLDP 135
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 125 bits (301), Expect = 5e-28
Identities = 63/133 (47%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 244
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 245 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQA-PARPGAIAPL 421
+R A+K +L+ P +EKLLP +K N+GFVF + DL ++R+ +L+NK + PAR G IAP+
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 422 SVVIPAHNTGLGP 460
V IP TG+ P
Sbjct: 121 DVFIPPGPTGMDP 133
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 98.3 bits (234), Expect = 7e-20
Identities = 49/123 (39%), Positives = 73/123 (59%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 271
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 272 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 451
++ P L+ L ++K N +F + ++ +V+ + +V APA+ G AP V+IPA TG
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 452 LGP 460
+ P
Sbjct: 129 MEP 131
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 96.7 bits (230), Expect = 2e-19
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Frame = +2
Query: 56 QSKMGREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLM 229
Q G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M
Sbjct: 8 QPPSGYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRM 67
Query: 230 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 409
+NT+MR A+++ L+ P LE LL +I+G V F+FT D + L E+K APA+PG
Sbjct: 68 SRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGD 127
Query: 410 IAPLSVVIPAHNTGLGP 460
IAP +V+P T P
Sbjct: 128 IAPEDIVVPEGPTPFEP 144
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 92.7 bits (220), Expect = 3e-18
Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 18/150 (12%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR-ISLRGHSIVLMGKNT 241
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR I + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 242 MMRKAIKDHLETNPA-----------------LEKLLPHIKGNVGFVFTRGDLVDVRDKL 370
+ +K + ++ P L+ L + G VGF+FT + D++ +
Sbjct: 61 LFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPII 120
Query: 371 LENKVQAPARPGAIAPLSVVIPAHNTGLGP 460
ENKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 121 EENKVETPARVGAVAPIDVVIPPGPTGMDP 150
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 87.0 bits (206), Expect = 2e-16
Identities = 52/127 (40%), Positives = 73/127 (57%)
Frame = +2
Query: 80 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 259
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 260 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 439
+ L+ + L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI
Sbjct: 69 -NQLD-DDKLKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEP 126
Query: 440 HNTGLGP 460
T GP
Sbjct: 127 MLTQSGP 133
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 83.8 bits (198), Expect = 2e-15
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 18/150 (12%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNT 241
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR + S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 242 MMRKAIKDHL------ETN-----------PALEKLLPHIKGNVGFVFTRGDLVDVRDKL 370
+++ A++ + E++ P +E L+ +KGN+G +FT DL D++D +
Sbjct: 61 LIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDII 120
Query: 371 LENKVQAPARPGAIAPLSVVIPAHNTGLGP 460
+ +APAR G++A V I A TGL P
Sbjct: 121 DRHTREAPARVGSVAQCDVWIKAGGTGLDP 150
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 81.0 bits (191), Expect = 1e-14
Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 17/140 (12%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 271
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 272 -ETN----------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPAR 400
E N P LE L+P ++GNV +F ++ +V + E+KV A A+
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAK 122
Query: 401 PGAIAPLSVVIPAHNTGLGP 460
G IAP V + TG+ P
Sbjct: 123 AGTIAPNDVHVYPGPTGMDP 142
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 80.2 bits (189), Expect = 2e-14
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 16/144 (11%)
Frame = +2
Query: 77 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKA 256
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 257 IK---DHLETN-------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQ 388
++ L T+ P L L+PH+K + +VF + ++ K+ V
Sbjct: 67 VQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVP 126
Query: 389 APARPGAIAPLSVVIPAHNTGLGP 460
APAR G +A V+IP TG+ P
Sbjct: 127 APARVGTVAQKDVMIPPGPTGMDP 150
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 78.2 bits (184), Expect = 8e-14
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSI-VLMGKNTMMRKAIKDH 268
K +Y K+ L +Y K +V + NV + Q+ IR L H VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 269 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 448
E P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T
Sbjct: 71 KEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRT 130
Query: 449 GLGP 460
+ P
Sbjct: 131 SMSP 134
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 77.4 bits (182), Expect = 1e-13
Identities = 50/119 (42%), Positives = 58/119 (48%)
Frame = -2
Query: 459 GPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM*GSSFSRAG 280
G PVL A +GA AP AGA TL S VKTKPT PL G++FS++G
Sbjct: 21 GSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLVKTKPTLPLTKGNNFSKSG 80
Query: 279 FVSRWSLMAFLIMVFLPMSTML*PRNEXXXXXXXCEPTLSAPTMKHFGYSSNSWMILTK 103
+ LMA L MVFLP+ T P N E TLS PT YSS + L K
Sbjct: 81 KSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNLAK 139
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 77.4 bits (182), Expect = 1e-13
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 271
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 272 ETNPA--LEKLLPH-------IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 424
E A +KLL + + GN +FT ++ + L +++VQAPAR GAIAP
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCD 127
Query: 425 VVIPAHNTGLGP 460
V++PA NTG+ P
Sbjct: 128 VIVPAGNTGMEP 139
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/129 (28%), Positives = 68/129 (52%)
Frame = +2
Query: 74 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 253
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 254 AIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 433
A++ E L+ L +++G VG V T + + +L +K AP G +AP +V+
Sbjct: 70 ALE---EAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVV 126
Query: 434 PAHNTGLGP 460
P +TG+ P
Sbjct: 127 PEGDTGIDP 135
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 72.9 bits (171), Expect = 3e-12
Identities = 36/123 (29%), Positives = 67/123 (54%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 271
KS F K L ++ + +V +N+ S+Q+++ + L SI++ GKNT+++K ++D L
Sbjct: 9 KSLVFKKFNFLFSKFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRL 68
Query: 272 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 451
+ + ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 69 KNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTN 128
Query: 452 LGP 460
+ P
Sbjct: 129 ISP 131
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect = 2e-11
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 248 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 385
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 68.1 bits (159), Expect = 9e-11
Identities = 43/137 (31%), Positives = 74/137 (54%)
Frame = +2
Query: 50 FTQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLM 229
F M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LM
Sbjct: 20 FFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLM 79
Query: 230 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 409
GKN+ +R+AI D P L + +KG+V FVF +G+ D++ + EN +A A+ G
Sbjct: 80 GKNSAIRRAIAD--LGKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGN 137
Query: 410 IAPLSVVIPAHNTGLGP 460
+A V + + TG+ P
Sbjct: 138 VAQRDVWVESCITGMTP 154
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 68.1 bits (159), Expect = 9e-11
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Frame = +2
Query: 83 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVL-MGKNTMMRKAI 259
A WK ++ +L+ YP +V ++ + + Q+R +R + +L + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 260 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 433
K + P LEKL+ +I G + T + + L +N+ APA+PGA+ P VV+
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVV 124
Query: 434 PAHNTGLGP 460
PA T L P
Sbjct: 125 PAGPTPLAP 133
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 61.7 bits (143), Expect = 7e-09
Identities = 34/126 (26%), Positives = 68/126 (53%)
Frame = +2
Query: 83 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 262
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 263 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 442
+ +E L +++G VFT+ + + L ++K +APA+ G+IAP +V+PA
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAG 122
Query: 443 NTGLGP 460
+T P
Sbjct: 123 DTSFPP 128
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 268
WK ++ +L+ ++ I + + + Q R LRGH +V + +N + A++
Sbjct: 21 WKVKVLKELEELIKKHSVIMIFDLRELPASMLHQYRRVLRGHGVVKVFRNKLFLIALRRI 80
Query: 269 L--ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 442
N +EK ++ G GF+FT + D+ +++N V+ A+PG + +++PA
Sbjct: 81 YGDSVNAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAG 137
Query: 443 NTGLGP 460
NTG+ P
Sbjct: 138 NTGINP 143
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.1 bits (139), Expect = 2e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 215 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP 394
S+ M K+++ +A K NP L+P + GNVG +FT+GDL + +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 395 ARPGAIAPLSVVIPAHNTGL 454
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 2e-08
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +2
Query: 170 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRG 343
G + + R +V + K + + + H E NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 344 DLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 454
DL +V ++ + KV APAR G ++ + V++P NTGL
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 2e-08
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +2
Query: 278 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 454
NP L+P + GNVG +FT+GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 60.1 bits (139), Expect = 2e-08
Identities = 34/114 (29%), Positives = 58/114 (50%)
Frame = +2
Query: 119 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKL 298
+LL +YP F+ + S+ + + R LR + ++ + K T+ + A PA ++
Sbjct: 29 ELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EI 86
Query: 299 LPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 460
++G VGF FT + +V + EN V+ A+PG AP +V+PA T P
Sbjct: 87 AEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASP 140
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 59.7 bits (138), Expect = 3e-08
Identities = 34/124 (27%), Positives = 59/124 (47%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 268
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARSF--- 67
Query: 269 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 448
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T
Sbjct: 68 --GGSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPT 125
Query: 449 GLGP 460
L P
Sbjct: 126 SLRP 129
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 59.3 bits (137), Expect = 4e-08
Identities = 34/103 (33%), Positives = 49/103 (47%)
Frame = -1
Query: 433 NDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDG 254
N D W N + + + V I + GED+ N++LD R+Q F W D
Sbjct: 204 NPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEVRDETSDS 263
Query: 253 FPHHGVFAHEHNAVTTQ*NTDLLHLLRAYIVRTHYETFWVFVQ 125
HGV H+ N+ +Q +D +HLL +IV T+ E VF Q
Sbjct: 264 SSDHGVLTHQDNSSASQVLSDFVHLLGRHIVNTNNEDRLVFFQ 306
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 59.3 bits (137), Expect = 4e-08
Identities = 36/124 (29%), Positives = 62/124 (50%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 268
WK + +I + ++E+ +V + + Q+QQIR +LRG + V M +NT++ A+
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALN-- 68
Query: 269 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 448
E ++ L H +G +FT + + L + K + A+PG AP +VIP T
Sbjct: 69 -ELGGSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPT 127
Query: 449 GLGP 460
P
Sbjct: 128 SFKP 131
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 59.3 bits (137), Expect = 4e-08
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Frame = +2
Query: 83 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 262
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 263 DHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 436
+ E NP KL+ ++ V T + + L E+K AP + GAIAP + +
Sbjct: 71 EVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVK 130
Query: 437 AHNTGLGP 460
+ +TG+ P
Sbjct: 131 SGSTGMPP 138
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 56.8 bits (131), Expect = 2e-07
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 271
K +I + D Y +++ + N+ S QQ+R S++G++ + MGKN +MR A+
Sbjct: 33 KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYARIFMGKNQLMRYALGKTE 92
Query: 272 ETNPALE--KLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 436
E + + +L +KG G +FT VR L AR G +A ++VIP
Sbjct: 93 EESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP 149
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 55.6 bits (128), Expect = 5e-07
Identities = 34/123 (27%), Positives = 63/123 (51%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 271
K+ + ++ +L +Y I+ + V S Q+ +R +L+ K+ + +KA+++
Sbjct: 12 KTQMYQQLQELPKKYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN-- 69
Query: 272 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 451
P ++ ++ KG V +FT + L +NK+ AR G IA + VV+PA NTG
Sbjct: 70 SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTG 129
Query: 452 LGP 460
+ P
Sbjct: 130 IAP 132
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 54.0 bits (124), Expect = 1e-06
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 271
K F I + + Y CF+ DN+ + ++ +R L I GK + +A+
Sbjct: 23 KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELNDCRI-FFGKTKLTARALGTTP 81
Query: 272 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 439
E A L+KL ++ G+VG +FT D +++D + AR G++A ++ IP+
Sbjct: 82 EDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 52.8 bits (121), Expect = 3e-06
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +2
Query: 83 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 262
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 263 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLEN-KVQAPARPGAIAPLSVVIPA 439
+ +EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA
Sbjct: 74 N---AGIDIEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPA 129
Query: 440 HNTGL 454
+TG+
Sbjct: 130 GDTGM 134
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 52.0 bits (119), Expect = 6e-06
Identities = 29/117 (24%), Positives = 57/117 (48%)
Frame = +2
Query: 110 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 289
K I LL+ Y IV +N+ S+Q+ IR LRG S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRW 70
Query: 290 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 460
+ ++ N+G +FT +L + + + + + G IA +++I L P
Sbjct: 71 MSVKEYLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSP 127
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 50.0 bits (114), Expect = 2e-05
Identities = 30/104 (28%), Positives = 51/104 (49%)
Frame = +2
Query: 149 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 328
+V +++ + Q+ +R LR K+ + RKA+ P ++K++ + G F
Sbjct: 17 LVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMF 74
Query: 329 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 460
+FT + L +NK AR G IA + V +PA NTG+ P
Sbjct: 75 MFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAP 118
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 49.2 bits (112), Expect = 4e-05
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 62 KMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNT 241
K G E KA F + Q LD + +I N+ + +++IR +G S + MGK
Sbjct: 17 KKGHEGKAA----LFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTK 71
Query: 242 MMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP-ARPGAI 412
+M KA+ E A + KL + G VG +FT +V E+ VQ AR GA+
Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAV 130
Query: 413 APLSVVIPA 439
AP + VIPA
Sbjct: 131 APFTHVIPA 139
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 48.8 bits (111), Expect = 6e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 262
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 263 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 439
E P L KL + G VG +FT +V + AR G +A +V +PA
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPA 140
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 48.0 bits (109), Expect = 1e-04
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI-KDH 268
K K+ Q LDEY + ++V N +Q++ +IR ++ + L G N + A+ K H
Sbjct: 17 KKQDVAKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL-LFGINKVTVWALGKTH 75
Query: 269 LET-NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 433
++ P L L ++KG +FT+ ++R++L + RPGA A +V I
Sbjct: 76 KDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRI 131
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 47.2 bits (107), Expect = 2e-04
Identities = 27/124 (21%), Positives = 59/124 (47%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 268
WK + I +L+ + +V + + + ++Q+IR L+ +++ + +NT+ +A+
Sbjct: 14 WKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQL 73
Query: 269 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 448
E+ P + + L + +FT + L + K +P + GAIAP +++ T
Sbjct: 74 GESIPEMTRYLDN---QTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPT 130
Query: 449 GLGP 460
P
Sbjct: 131 SFPP 134
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 46.8 bits (106), Expect = 2e-04
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 268
WK + KI+ + + IV V + +Q++R +L G + M +NT+ A D
Sbjct: 16 WKKDEIKKIVDGVHSHKVVGIVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DS 74
Query: 269 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 448
L ++L ++ G + V+T + + L K + A+ G IAP +VIP T
Sbjct: 75 LPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPT 134
Query: 449 GLGP 460
P
Sbjct: 135 SFKP 138
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 46.8 bits (106), Expect = 2e-04
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDH 268
K+ ++ L +Y + + + ++ R LR S++ + KNT+ A+K+
Sbjct: 17 KAKLLEELSGYLKQYRYYMVASITGLPASVVKTSRSLLRSDGSLMKVVKNTIFLLALKN- 75
Query: 269 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 448
T +E + H++G +FT + ++ L + K+ AR G IA +V+PA NT
Sbjct: 76 --TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNT 133
Query: 449 GLGP 460
G+ P
Sbjct: 134 GIPP 137
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 46.4 bits (105), Expect = 3e-04
Identities = 33/124 (26%), Positives = 55/124 (44%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 268
WK + L YP I + Q+Q++R L + + KN ++ +A+++
Sbjct: 15 WKIEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNA 74
Query: 269 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 448
E+LL G +FT + ++ L + K + +PG IA +VIP NT
Sbjct: 75 GIDTSKFEELLT---GQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNT 131
Query: 449 GLGP 460
GL P
Sbjct: 132 GLSP 135
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 45.6 bits (103), Expect = 5e-04
Identities = 27/124 (21%), Positives = 60/124 (48%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 268
WK ++++ + + G + + + Q++R LR S V + N + R+AI
Sbjct: 14 WKLREVDELVERIRSSRVVGVAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAI--- 70
Query: 269 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 448
L+++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 449 GLGP 460
P
Sbjct: 131 SFSP 134
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 45.2 bits (102), Expect = 7e-04
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Frame = +2
Query: 53 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 232
TQ+K REDK +I + L++Y + N+ + +QQIR G S + +G
Sbjct: 15 TQAKT-REDK----DKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLG 69
Query: 233 KNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 406
N +M AI E+ L KL P + G G +FT +V++ AR G
Sbjct: 70 NNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATVGAPVYARTG 129
Query: 407 AIAPLSVVI 433
A S+V+
Sbjct: 130 QTATESLVL 138
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 44.4 bits (100), Expect = 0.001
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Frame = +2
Query: 71 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMM 247
RE WK ++ + L E ++ + + + R R + + KN ++
Sbjct: 13 REKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVIKNNLV 72
Query: 248 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 427
RKA + P +++ + G+ F+FT + + K+ + + APA+PG +A +
Sbjct: 73 RKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEI 130
Query: 428 VIPAHNTGLGP 460
V+PA +TGL P
Sbjct: 131 VVPAGDTGLTP 141
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.4 bits (100), Expect = 0.001
Identities = 26/58 (44%), Positives = 31/58 (53%)
Frame = -2
Query: 450 PVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM*GSSFSRAGF 277
PVL G T A P RAGA TL+ + S TS +SP VK PT P G+ + GF
Sbjct: 17 PVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRRGTRLRKTGF 74
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 44.0 bits (99), Expect = 0.002
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +2
Query: 53 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 232
TQ+K ++D+ WKS ++ L E ++ +N+ + +++R + + +G
Sbjct: 13 TQTK--KKDRE-WKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAATEATTTFFVG 69
Query: 233 KNTMMRKAI-KD-HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 406
N ++R A+ +D E + L +KG+ G +FT DV V+ AR G
Sbjct: 70 SNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERFAVKDYARTG 129
Query: 407 AIAPLSVVIPA 439
A+A +V + A
Sbjct: 130 ALARETVTVEA 140
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 44.0 bits (99), Expect = 0.002
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Frame = +2
Query: 59 SKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKN 238
+K+ ++ K T K+N ++ +D+Y FI N+ S + IR + +S GKN
Sbjct: 13 TKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKN 71
Query: 239 TMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 412
++ A+ A L K +KG G +FT +V + E + AR G +
Sbjct: 72 NVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDV 131
Query: 413 APLSVVIP 436
A +VV+P
Sbjct: 132 ATETVVLP 139
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 44.0 bits (99), Expect = 0.002
Identities = 30/117 (25%), Positives = 59/117 (50%)
Frame = +2
Query: 110 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 289
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+ D L +
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGD--Y 74
Query: 290 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 460
KL ++ + + + + + + KV +P +P ++P+ VV+ T + P
Sbjct: 75 LKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPP 131
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 40.3 bits (90), Expect = 0.020
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KD 265
K ++ + +D Y FI N+ + +++ +R + + HS + GKN +M A+ +
Sbjct: 30 KQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGREP 88
Query: 266 HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 427
E L ++ H++G VG +FT +V + K AR G A +V
Sbjct: 89 SSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTV 142
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 40.3 bits (90), Expect = 0.020
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Frame = +2
Query: 71 REDKATW--KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 244
R DK T K+N K+ EYP +I+G ++ + ++++R +G S + GK +
Sbjct: 14 RTDKKTKEDKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKG-SKIFFGKLKV 72
Query: 245 MRKAI--KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 418
+ A+ + E + + + G+VG +FT +V D + + AR G+ A
Sbjct: 73 LALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQRVDFARGGSKAT 132
Query: 419 LSVVIP 436
++ +P
Sbjct: 133 ETIELP 138
>UniRef50_UPI000150A24A Cluster: hypothetical protein
TTHERM_00500880; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00500880 - Tetrahymena
thermophila SB210
Length = 415
Score = 34.3 bits (75), Expect = 1.3
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -1
Query: 199 NTDLLHLLRAYIVRTHYETFWVFVQQ---LDDFNEVIGLPGSLVLPTHLGLSEVGTSEKF 29
N DLL LL AY + H+E ++ + Q LDD N+V L T L ++EV S+ F
Sbjct: 327 NLDLLILLFAYPTKEHFERKFISLSQKNRLDDLNQV-----KQHLCTSLKVTEVDYSKNF 381
Query: 28 KDKTNTH 8
+ N H
Sbjct: 382 NNYKNYH 388
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 34.3 bits (75), Expect = 1.3
Identities = 24/102 (23%), Positives = 49/102 (48%)
Frame = +2
Query: 149 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 328
I + ++ +Q+IR +R + + + K ++ +A+K+ + A E L +
Sbjct: 25 IANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALL 83
Query: 329 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 454
+ T ++ + +E+KV P + G IAP +VIP T +
Sbjct: 84 LSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNI 125
>UniRef50_A1FL24 Cluster: ABC-2 type transporter; n=1; Pseudomonas
putida W619|Rep: ABC-2 type transporter - Pseudomonas
putida W619
Length = 266
Score = 33.5 bits (73), Expect = 2.2
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 267 ILKQIQLSKNCFLTSREMLALSS-PVEILLMCVINCWRTKSKPRLVLEPLLHCLSSFPLI 443
+L+ +Q K FL ++ SS P IL + VI S L+L L +S FPL+
Sbjct: 86 LLELVQRGKGVFLEHANLIKKSSFPKFILFIPVIATAALNSLILLILVVLFMVISGFPLM 145
Query: 444 TLALV 458
T ALV
Sbjct: 146 TTALV 150
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 33.1 bits (72), Expect = 3.0
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 119 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGH--SIVLMGKNTMMRKAIKDH 268
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQH 217
>UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7271,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 145
Score = 32.7 bits (71), Expect = 3.9
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +3
Query: 315 EMLALS-SPVEILLMCVINCWRTKSKPR 395
+ LAL+ +PV++LL CV+ CW T S+PR
Sbjct: 74 QALALALAPVQLLLACVLTCW-TGSRPR 100
>UniRef50_UPI00005874CE Cluster: PREDICTED: similar to
OTTHUMP00000029908; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to OTTHUMP00000029908
- Strongylocentrotus purpuratus
Length = 379
Score = 32.3 bits (70), Expect = 5.2
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 236 NTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 415
N M+K I+ H+E N ALE ++ +K +V + T + DVR ++ + + +
Sbjct: 307 NITMKKEIEGHIEENEALETIIQQLKEDVKSMST-DPISDVRKQMFPHLYKEVQKCTPDM 365
Query: 416 PLSVVIPAHN 445
+ + IP H+
Sbjct: 366 DVELDIPRHD 375
>UniRef50_A6C829 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 373
Score = 31.9 bits (69), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 257 WLSSSWCFCP*AQCCDHAMKYGSVASVASLHCPHPL*NILGI 132
+ S C C QC M++G ++ V +LH P P+ I GI
Sbjct: 279 YYSMPHCLC---QCMPEMMRFGEMSDVVALHAPRPVLLINGI 317
>UniRef50_A3TZF9 Cluster: Acyl-CoA synthase; n=1; Oceanicola
batsensis HTCC2597|Rep: Acyl-CoA synthase - Oceanicola
batsensis HTCC2597
Length = 539
Score = 31.5 bits (68), Expect = 9.0
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +2
Query: 191 IRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLL----PHIK-GNVGFVFTRGDLVD 355
++I+ R + ++G + I+ HLET+PA+ + + PH + G VGF F R V+
Sbjct: 420 LKITGRIKEMFIVGGSNTYPAEIEAHLETHPAIRQAMVVGVPHERLGQVGFAFIR--RVE 477
Query: 356 VRDKLLENKVQAPARPGAIAPLSV 427
D + E V R G IA V
Sbjct: 478 GADPIDEKSVIDHCR-GVIADYKV 500
>UniRef50_Q8IDM7 Cluster: DNA topoisomerase III, putative; n=2;
Plasmodium|Rep: DNA topoisomerase III, putative -
Plasmodium falciparum (isolate 3D7)
Length = 710
Score = 31.5 bits (68), Expect = 9.0
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -1
Query: 196 TDLLHLLRAYIVRTHYETFWVFVQQLDDFNEVIGLPGSLVLPTHLGLSEVGTSEKFKD 23
++LL L+ + + T T ++ + N VI SL +PT+LG++ V + +KFKD
Sbjct: 584 SNLLTLMDKFSIGTD-ATMHEHIENIQKRNYVIKNSKSLFIPTNLGIALVQSYKKFKD 640
>UniRef50_Q5BC61 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 389
Score = 31.5 bits (68), Expect = 9.0
Identities = 31/108 (28%), Positives = 46/108 (42%)
Frame = +2
Query: 101 YFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETN 280
Y + ++L YP + A Q++Q+ R SLR + L R H +N
Sbjct: 244 YLSEALELAYSYPSPLVTAAIPDLYQRVQETRHSLREATATLRACTNRDR-----HSHSN 298
Query: 281 PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 424
+LE L N+ LV +RD LLE +A +RP + LS
Sbjct: 299 QSLESLTGDSGPNLLLQGAEQTLVVLRD-LLERLARAASRPEGSSALS 345
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,140,912
Number of Sequences: 1657284
Number of extensions: 11036640
Number of successful extensions: 33464
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 32384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33428
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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