Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B22
         (431 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/29 (20%), Positives = 14/29 (48%)
 Frame = +1

Query: 316 FIIMYNNTSWSRVSARV*LFLFGTIIPCV 402
           F + YN   W+R +    ++L+   +  +
Sbjct: 119 FDVFYNTAVWARFNVNEQMYLYALSVAVI 147


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 252 VIPTLYGGFDVKHKYCNRKLYVYY 323
           +IP  Y G+ + H Y      +Y+
Sbjct: 200 IIPANYSGWYLNHDYNLENKLIYF 223


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/29 (20%), Positives = 14/29 (48%)
 Frame = +1

Query: 316 FIIMYNNTSWSRVSARV*LFLFGTIIPCV 402
           F + YN   W+R +    ++L+   +  +
Sbjct: 119 FDVFYNTAVWARFNVNEQMYLYALSVAVI 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,342
Number of Sequences: 438
Number of extensions: 2377
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)