Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_B20
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101053-1|AAI01054.1| 792|Homo sapiens zinc finger protein 541... 33 0.35
BC101052-1|AAI01053.1| 792|Homo sapiens zinc finger protein 541... 33 0.35
BC101051-1|AAI01052.1| 792|Homo sapiens zinc finger protein 541... 33 0.35
BC101050-1|AAI01051.1| 792|Homo sapiens zinc finger protein 541... 33 0.35
BC151245-1|AAI51246.1| 1486|Homo sapiens cut-like 2 (Drosophila)... 33 0.61
AB006631-1|BAA22962.2| 1505|Homo sapiens KIAA0293 protein. 33 0.61
BC119685-1|AAI19686.1| 424|Homo sapiens secernin 3 protein. 32 0.81
BC119684-1|AAI19685.1| 426|Homo sapiens SCRN3 protein protein. 32 0.81
BC111739-1|AAI11740.1| 558|Homo sapiens RBM26 protein protein. 30 3.3
BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein. 30 3.3
BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif prote... 30 3.3
AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif prote... 30 3.3
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote... 30 3.3
AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif prote... 30 3.3
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote... 30 3.3
AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens ... 30 3.3
AK027339-1|BAB55046.1| 534|Homo sapiens protein ( Homo sapiens ... 30 3.3
AK024610-1|BAB14933.1| 243|Homo sapiens protein ( Homo sapiens ... 30 3.3
AF273052-1|AAG34912.1| 254|Homo sapiens CTCL tumor antigen se70... 30 3.3
AF026071-1|AAB82288.1| 277|Homo sapiens soluble death receptor ... 30 4.3
BC017317-1|AAH17317.1| 425|Homo sapiens secernin 2 protein. 29 5.7
BC010408-1|AAH10408.2| 425|Homo sapiens secernin 2 protein. 29 5.7
BC002980-1|AAH02980.1| 401|Homo sapiens Ses2 protein protein. 29 5.7
BC040559-1|AAH40559.1| 386|Homo sapiens LEF1 protein protein. 29 10.0
>BC101053-1|AAI01054.1| 792|Homo sapiens zinc finger protein 541
protein.
Length = 792
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 365 GYGQPGTRAP-KRAPLAEGCASVTPSLWRGSTCAKNFGFRHTSGRSTSRFQP-RKKKKVL 192
G PG P K+AP G AS +G C++ G+R RF RK+K +
Sbjct: 151 GEEPPGASLPGKQAPAENGAASRITKGEKGPACSRGGGYRLLGNPRAPRFSGFRKEKAKM 210
Query: 191 *VRAYAPPSFARMQSVS 141
+ A PS M S S
Sbjct: 211 DMCCAASPSQVAMASFS 227
>BC101052-1|AAI01053.1| 792|Homo sapiens zinc finger protein 541
protein.
Length = 792
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 365 GYGQPGTRAP-KRAPLAEGCASVTPSLWRGSTCAKNFGFRHTSGRSTSRFQP-RKKKKVL 192
G PG P K+AP G AS +G C++ G+R RF RK+K +
Sbjct: 151 GEEPPGASLPGKQAPAENGAASRITKGEKGPACSRGGGYRLLGNPRAPRFSGFRKEKAKM 210
Query: 191 *VRAYAPPSFARMQSVS 141
+ A PS M S S
Sbjct: 211 DMCCAASPSQVAMASFS 227
>BC101051-1|AAI01052.1| 792|Homo sapiens zinc finger protein 541
protein.
Length = 792
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 365 GYGQPGTRAP-KRAPLAEGCASVTPSLWRGSTCAKNFGFRHTSGRSTSRFQP-RKKKKVL 192
G PG P K+AP G AS +G C++ G+R RF RK+K +
Sbjct: 151 GEEPPGASLPGKQAPAENGAASRITKGEKGPACSRGGGYRLLGNPRAPRFSGFRKEKAKM 210
Query: 191 *VRAYAPPSFARMQSVS 141
+ A PS M S S
Sbjct: 211 DMCCAASPSQVAMASFS 227
>BC101050-1|AAI01051.1| 792|Homo sapiens zinc finger protein 541
protein.
Length = 792
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 365 GYGQPGTRAP-KRAPLAEGCASVTPSLWRGSTCAKNFGFRHTSGRSTSRFQP-RKKKKVL 192
G PG P K+AP G AS +G C++ G+R RF RK+K +
Sbjct: 151 GEEPPGASLPGKQAPAENGAASRITKGEKGPACSRGGGYRLLGNPRAPRFSGFRKEKAKM 210
Query: 191 *VRAYAPPSFARMQSVS 141
+ A PS M S S
Sbjct: 211 DMCCAASPSQVAMASFS 227
>BC151245-1|AAI51246.1| 1486|Homo sapiens cut-like 2 (Drosophila)
protein.
Length = 1486
Score = 32.7 bits (71), Expect = 0.61
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -2
Query: 384 VECLVSRLRPTWHTGTKEGAS---RRGVCLGDTQSVARINVCKKLRFSAYVRAFNEQIST 214
V L+SR +P WH + +G R + L D +V ++ KKL AY++ IST
Sbjct: 1082 VSDLLSRPKP-WHKLSLKGREPFVRMQLWLNDPHNVEKLRDMKKLEKKAYLKRRYGLIST 1140
Query: 213 T*KKKSPVGTSLCAS 169
+SP S C S
Sbjct: 1141 GSDSESPATRSECPS 1155
>AB006631-1|BAA22962.2| 1505|Homo sapiens KIAA0293 protein.
Length = 1505
Score = 32.7 bits (71), Expect = 0.61
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -2
Query: 384 VECLVSRLRPTWHTGTKEGAS---RRGVCLGDTQSVARINVCKKLRFSAYVRAFNEQIST 214
V L+SR +P WH + +G R + L D +V ++ KKL AY++ IST
Sbjct: 1101 VSDLLSRPKP-WHKLSLKGREPFVRMQLWLNDPHNVEKLRDMKKLEKKAYLKRRYGLIST 1159
Query: 213 T*KKKSPVGTSLCAS 169
+SP S C S
Sbjct: 1160 GSDSESPATRSECPS 1174
>BC119685-1|AAI19686.1| 424|Homo sapiens secernin 3 protein.
Length = 424
Score = 32.3 bits (70), Expect = 0.81
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 360 RPTWHTGTKEGASRRGVCLGDTQSVARINVC 268
RP W G + GA+ GVC+G+ R VC
Sbjct: 72 RPAWLWGAEMGANEHGVCIGNEAVWGREEVC 102
>BC119684-1|AAI19685.1| 426|Homo sapiens SCRN3 protein protein.
Length = 426
Score = 32.3 bits (70), Expect = 0.81
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 360 RPTWHTGTKEGASRRGVCLGDTQSVARINVC 268
RP W G + GA+ GVC+G+ R VC
Sbjct: 72 RPAWLWGAEMGANEHGVCIGNEAVWGREEVC 102
>BC111739-1|AAI11740.1| 558|Homo sapiens RBM26 protein protein.
Length = 558
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 402 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 449
>BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein.
Length = 983
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 827 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 874
>BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 824 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 871
>AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 824 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 871
>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 852 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 899
>AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 824 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 871
>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 852 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 899
>AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens
cDNA FLJ14550 fis, clone NT2RM2001696. ).
Length = 680
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 524 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 571
>AK027339-1|BAB55046.1| 534|Homo sapiens protein ( Homo sapiens
cDNA FLJ14433 fis, clone HEMBA1006676. ).
Length = 534
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 378 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 425
>AK024610-1|BAB14933.1| 243|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20957 fis, clone ADSE02053. ).
Length = 243
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 87 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 134
>AF273052-1|AAG34912.1| 254|Homo sapiens CTCL tumor antigen se70-2
protein.
Length = 254
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -1
Query: 403 LCAG*GRGVFSQSVTANLAHGHQRGRLSQRGVPR*HPVCGEDQRVQKTSVF 251
L +G GRG+ S+ A HG RGR RGVP H V R + S F
Sbjct: 98 LSSGRGRGIHSRGRGA--VHGRGRGRGRGRGVPG-HAVVDHRPRALEISAF 145
>AF026071-1|AAB82288.1| 277|Homo sapiens soluble death receptor 3
beta protein.
Length = 277
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 283 RHRLGVTEAHPSARGALFGARVPGWP 360
R R G T HP A ++ G PGWP
Sbjct: 225 RVRRGATTQHPPAAFSVLGPGAPGWP 250
>BC017317-1|AAH17317.1| 425|Homo sapiens secernin 2 protein.
Length = 425
Score = 29.5 bits (63), Expect = 5.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 360 RPTWHTGTKEGASRRGVCLGD 298
RP+W G + GA+ GVC+G+
Sbjct: 77 RPSWLWGAEMGANEHGVCIGN 97
>BC010408-1|AAH10408.2| 425|Homo sapiens secernin 2 protein.
Length = 425
Score = 29.5 bits (63), Expect = 5.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 360 RPTWHTGTKEGASRRGVCLGD 298
RP+W G + GA+ GVC+G+
Sbjct: 77 RPSWLWGAEMGANEHGVCIGN 97
>BC002980-1|AAH02980.1| 401|Homo sapiens Ses2 protein protein.
Length = 401
Score = 29.5 bits (63), Expect = 5.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 360 RPTWHTGTKEGASRRGVCLGD 298
RP+W G + GA+ GVC+G+
Sbjct: 100 RPSWLWGAEMGANEHGVCIGN 120
>BC040559-1|AAH40559.1| 386|Homo sapiens LEF1 protein protein.
Length = 386
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 305 RHTPLREAPSLVPVCQVGRNRLTKHSTSLTGAKMPGPPEAHYTCI 439
RH P + P+ P+ G ++T + +PGPP H T I
Sbjct: 186 RHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGI 230
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,905,763
Number of Sequences: 237096
Number of extensions: 1577290
Number of successful extensions: 3360
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3348
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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