Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B13
         (278 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024967-1|ABE01197.1|  604|Drosophila melanogaster IP15225p pro...    27   4.7  
AY051963-1|AAK93387.1|  448|Drosophila melanogaster LD43003p pro...    27   4.7  
AE014298-1624|AAS65315.1|  448|Drosophila melanogaster CG1745-PA...    27   4.7  
AE014298-1623|AAF48046.1|  837|Drosophila melanogaster CG1745-PB...    27   4.7  
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei...    26   6.2  
BT001824-1|AAN71579.1|  155|Drosophila melanogaster RH43029p pro...    26   8.2  

>BT024967-1|ABE01197.1|  604|Drosophila melanogaster IP15225p
           protein.
          Length = 604

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 260 RKGKNLEQSNCKTITSDISFNHL 192
           RK KN+EQ +     S+ SF+HL
Sbjct: 56  RKSKNVEQCSIDLFDSETSFDHL 78


>AY051963-1|AAK93387.1|  448|Drosophila melanogaster LD43003p
           protein.
          Length = 448

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 260 RKGKNLEQSNCKTITSDISFNHL 192
           RK KN+EQ +     S+ SF+HL
Sbjct: 56  RKSKNVEQCSIDLFDSETSFDHL 78


>AE014298-1624|AAS65315.1|  448|Drosophila melanogaster CG1745-PA,
           isoform A protein.
          Length = 448

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 260 RKGKNLEQSNCKTITSDISFNHL 192
           RK KN+EQ +     S+ SF+HL
Sbjct: 56  RKSKNVEQCSIDLFDSETSFDHL 78


>AE014298-1623|AAF48046.1|  837|Drosophila melanogaster CG1745-PB,
           isoform B protein.
          Length = 837

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 260 RKGKNLEQSNCKTITSDISFNHL 192
           RK KN+EQ +     S+ SF+HL
Sbjct: 56  RKSKNVEQCSIDLFDSETSFDHL 78


>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
            protein.
          Length = 4167

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -1

Query: 140  NRLKFHLTLNISNKHFPNPDIN 75
            N  +F++T  ISN H+P P+I+
Sbjct: 3223 NSFRFYITTKISNPHYP-PEIS 3243


>BT001824-1|AAN71579.1|  155|Drosophila melanogaster RH43029p
           protein.
          Length = 155

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 278 LHIGNERKGKNLEQSNCKTITSDISFNHLQ 189
           LH+G +R  K  ++   K  T   SF+H Q
Sbjct: 86  LHLGQKRGAKRRKEKEMKKATMYFSFSHNQ 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,621,351
Number of Sequences: 53049
Number of extensions: 192419
Number of successful extensions: 297
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 24,988,368
effective HSP length: 71
effective length of database: 21,221,889
effective search space used: 445659669
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)