Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B12
         (331 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    22   6.9  
AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...    22   6.9  
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    21   9.1  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 92  LDQYSRYITMYWL 54
           +D +SRY T+Y+L
Sbjct: 100 IDDFSRYTTVYFL 112


>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
           initiation factor 4C (1A) protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 218 KIVYLNDGRIILLHLRTV--NSAEVNKYYVP 304
           K V++N G IIL+ LR    + A+V   Y P
Sbjct: 67  KKVWINQGDIILIGLRDYQDSKADVILKYTP 97


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 96  LSRSIFTVYHYVLVSG 49
           L RS+ T YH +L+ G
Sbjct: 111 LMRSVTTYYHPILMGG 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,776
Number of Sequences: 2352
Number of extensions: 3839
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)