Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B11
         (291 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   3.1  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   3.1  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    21   7.1  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    21   9.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    21   9.4  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = +1

Query: 241 HPCSGI-GSEPSVAGA 285
           HPCSGI GS  ++ G+
Sbjct: 390 HPCSGISGSTTAIGGS 405


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = +1

Query: 241 HPCSGI-GSEPSVAGA 285
           HPCSGI GS  ++ G+
Sbjct: 390 HPCSGISGSTTAIGGS 405


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 213 WFGIIVSGIFVTLP 172
           W G  +S  FVT P
Sbjct: 125 WLGAFISACFVTYP 138


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 210 FGIIVSGIFVTLP 172
           F + ++GIF++LP
Sbjct: 241 FALTIAGIFISLP 253


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 234 SSPTIPNWFGIIVSGIFVTLPSG 166
           S   IPNW G++   +++   SG
Sbjct: 375 SQADIPNWLGLLERTLWLQHLSG 397


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,418
Number of Sequences: 2352
Number of extensions: 2966
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17819379
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)