Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B10
         (394 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c...    30   2.4  
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch...    30   2.4  
AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein.             30   2.4  

>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy chain
            9 protein.
          Length = 4486

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +3

Query: 48   LFEISLSFN-KFANTYL*IGYRFYYIFTILNESRIYLDVV 164
            L +++L+F+ K A T+L  G +F+YIF + + + I+  ++
Sbjct: 2651 LIDLALAFHQKIATTFLPTGIKFHYIFNLRDFANIFQGIL 2690


>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain 9
            protein.
          Length = 4486

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +3

Query: 48   LFEISLSFN-KFANTYL*IGYRFYYIFTILNESRIYLDVV 164
            L +++L+F+ K A T+L  G +F+YIF + + + I+  ++
Sbjct: 2651 LIDLALAFHQKIATTFLPTGIKFHYIFNLRDFANIFQGIL 2690


>AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein.
          Length = 2992

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +3

Query: 48   LFEISLSFN-KFANTYL*IGYRFYYIFTILNESRIYLDVV 164
            L +++L+F+ K A T+L  G +F+YIF + + + I+  ++
Sbjct: 1233 LIDLALAFHQKIATTFLPTGIKFHYIFNLRDFANIFQGIL 1272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,699,536
Number of Sequences: 237096
Number of extensions: 832019
Number of successful extensions: 1049
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)