Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_B09
(313 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004... 31 0.25
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565... 29 0.77
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624... 29 0.77
04_01_0222 - 2805329-2805780,2805866-2806611,2806730-2806778,280... 29 0.77
03_05_0361 - 23448459-23448910,23448990-23449406,23449542-234497... 29 0.77
09_04_0176 + 15361766-15362836 28 1.8
01_03_0005 + 11568545-11569119,11569179-11569191 27 2.3
10_08_1059 + 22618999-22619206,22620386-22620416,22620440-226209... 27 3.1
07_03_1780 - 29465873-29466130,29466236-29466335,29466473-294665... 27 3.1
05_05_0381 + 24531622-24532918,24535334-24535468,24535592-245357... 27 3.1
04_04_1670 - 35227581-35228168,35228250-35228435,35228529-35228801 27 3.1
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 27 4.1
10_07_0081 - 12716130-12716271,12716367-12716449,12716729-127167... 26 5.4
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118... 26 5.4
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 26 7.2
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 26 7.2
05_03_0678 - 16871481-16871620,16871836-16871881,16872170-168722... 26 7.2
05_03_0089 - 8327044-8327142,8327238-8327306,8327413-8327504,832... 26 7.2
04_04_1033 - 30269639-30269734,30269838-30270257,30270450-302706... 26 7.2
01_03_0021 + 11720744-11720898,11720991-11721246 26 7.2
01_01_0834 + 6522709-6523452 26 7.2
12_01_0079 + 644754-645932,645966-646061,646193-647122 25 9.5
11_01_0078 + 609005-610183,610217-610312,610444-611373 25 9.5
07_01_1103 + 10141766-10143583 25 9.5
04_04_1397 - 33230416-33230742,33230852-33231007,33231130-332315... 25 9.5
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 25 9.5
01_06_1638 + 38812226-38812660,38812989-38813063,38813180-388132... 25 9.5
>02_05_1230 -
35099942-35100018,35100138-35100221,35100367-35100475,
35100564-35100687,35101157-35101253,35101375-35101507,
35101654-35101731,35101821-35101928,35102011-35102078,
35102181-35102279,35102379-35102505,35102623-35102707,
35103297-35103373,35103482-35103562
Length = 448
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 148 EMMTMKAEGWEGRGEPKKRWMEYVWEDMKVTGLNEDTVAYR 26
E M++ A GWEG+ PK ++ + + G+ + VA+R
Sbjct: 163 ESMSVNAMGWEGQVNPKVNEVQKAQDCLLPMGITSENVAHR 203
>11_01_0687 -
5651002-5651453,5651535-5651951,5652621-5653338,
5654106-5654417,5654482-5654814
Length = 743
Score = 29.1 bits (62), Expect = 0.77
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 100 KKRWMEYVWEDMKVTGLNEDTV 35
+KRWM + W + K TG+ D +
Sbjct: 178 RKRWMLWTWLESKATGIGRDPI 199
>10_08_0095 +
14760292-14760624,14760689-14761000,14761768-14762489,
14762905-14763187,14763419-14763650,14763736-14764187
Length = 777
Score = 29.1 bits (62), Expect = 0.77
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 100 KKRWMEYVWEDMKVTGLNEDTV 35
+KRWM + W + K TG+ D +
Sbjct: 178 RKRWMLWTWLESKATGIGRDPI 199
>04_01_0222 -
2805329-2805780,2805866-2806611,2806730-2806778,
2807031-2807748,2808513-2808824
Length = 758
Score = 29.1 bits (62), Expect = 0.77
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 100 KKRWMEYVWEDMKVTGLNEDTV 35
+KRWM + W + K TG+ D +
Sbjct: 67 RKRWMLWTWLESKATGIGRDPI 88
>03_05_0361 -
23448459-23448910,23448990-23449406,23449542-23449735,
23449854-23449902,23450155-23450539,23450578-23450874,
23451650-23451961
Length = 701
Score = 29.1 bits (62), Expect = 0.77
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 100 KKRWMEYVWEDMKVTGLNEDTV 35
+KRWM + W + K TG+ D +
Sbjct: 67 RKRWMLWTWLESKATGIGRDPI 88
>09_04_0176 + 15361766-15362836
Length = 356
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 148 EMMTMKAEGW-EGRGEPKKRWMEYVWEDMK 62
EM+ KA W + R K +EY+W+D+K
Sbjct: 252 EMIMEKAREWYKSRNNDKPFTLEYMWKDLK 281
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 168 PSAFLPRVHFQTHS*HCPFLSRHTSISDVAAVSRLSLA 281
P+ FLP F +S PF S +S++ V+A+S + A
Sbjct: 143 PNPFLPYFPFYYYSPPPPFYSSGSSVAGVSAISSAAAA 180
>10_08_1059 +
22618999-22619206,22620386-22620416,22620440-22620974,
22621065-22621319
Length = 342
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = -1
Query: 184 GRKAEGEAFLPTEMMTMKAEGWEGRGEPKKRWMEYVWEDMKVTGLNEDTV 35
G E ++ PT++ GWE RG + +++ ++K++ N + V
Sbjct: 72 GHALESDSMGPTDLPVQNTAGWEARGATSRSSSKHL--ELKISPRNVNRV 119
>07_03_1780 -
29465873-29466130,29466236-29466335,29466473-29466559,
29466682-29467000,29467097-29468567
Length = 744
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 148 EMMTMKAEGWEGRGEPKKRWMEYVWEDMKV 59
++M E GR + KK+++ YVW +V
Sbjct: 373 QLMMADDEAGSGRKKKKKKYLPYVWRGARV 402
>05_05_0381 +
24531622-24532918,24535334-24535468,24535592-24535764,
24536029-24536239,24536287-24536554,24536664-24536814,
24536938-24537246
Length = 847
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 121 WEGRGEPKKRWMEYVWEDMKVTGLNEDTVAYRD 23
W G P K W W+ M+ TG+ DT+ Y++
Sbjct: 205 WNG---PNKVWRSGPWDGMQFTGV-PDTITYKN 233
>04_04_1670 - 35227581-35228168,35228250-35228435,35228529-35228801
Length = 348
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Frame = +1
Query: 166 LLQLFYH-----GCTSKLILDTVHSYHATRPSLMLQP 261
LL++F+H GC + L+L +S P+L LQP
Sbjct: 80 LLRIFFHDCFPQGCDASLLLTGANSEQQLPPNLTLQP 116
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 76 WEDMKVTGLNEDTVAY 29
W+DMK+ GL D VA+
Sbjct: 529 WDDMKIVGLQPDFVAF 544
>10_07_0081 - 12716130-12716271,12716367-12716449,12716729-12716785,
12716886-12716942,12717014-12717113,12717204-12717274,
12718284-12718460,12719142-12719312,12722151-12722234,
12722310-12722354,12722447-12722537,12722745-12722863,
12723213-12723434,12723630-12723854,12725366-12725571,
12726081-12726258,12726702-12726762,12727930-12728039,
12728126-12728257,12729136-12729208,12729608-12729645,
12730373-12730474,12730565-12730622,12731071-12731172,
12731240-12731386,12732023-12732159,12732256-12732405,
12733103-12733259,12733615-12733673,12733982-12734138,
12734209-12734354,12739177-12739320,12739478-12739606
Length = 1309
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 83 VRVGRYESNRAE*RHGGLQRCIKED 9
+R R S R E H LQRCIK+D
Sbjct: 1013 LRRSRMNSERHEEYHELLQRCIKDD 1037
>08_02_0550 +
18509365-18509589,18509668-18510644,18510828-18511802,
18511885-18512142,18512216-18512326,18512418-18512496,
18512595-18512687,18512773-18512958
Length = 967
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -1
Query: 169 GEAFLPTEMMTMKAEGWEGRGEPKKRWMEYVWEDMKVTGLNEDTVA 32
G+AFLPT ++ W+ KRW E+ + ++ GL+ TVA
Sbjct: 649 GKAFLPT--WELEEGPWQ-----LKRWHEWYMKASRIKGLSSFTVA 687
>07_03_0435 +
18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 36 TVSSFSPVTFISSHTYSIHLFFGSPLP 116
T + S + +S T +H FFGS LP
Sbjct: 320 TATVISTILLVSGLTTILHTFFGSRLP 346
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 149 GNDDYEG*GMGGERRAKEKMDGVR 78
GNDDY GG R ++K +G R
Sbjct: 485 GNDDYRRQPGGGSRYGRDKYEGER 508
>05_03_0678 -
16871481-16871620,16871836-16871881,16872170-16872243,
16872495-16872552,16872640-16872702,16872891-16873012,
16873132-16873247,16873367-16873428,16873497-16873589,
16874061-16874138,16874248-16874423,16874500-16874550,
16874964-16875078
Length = 397
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -3
Query: 116 GERRA---KEKMDGVRVGRYESNRAE*RHGGLQRCIKE 12
G RR+ KE ++ R + +S +H GL+RCI+E
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEE 279
>05_03_0089 -
8327044-8327142,8327238-8327306,8327413-8327504,
8327932-8329042
Length = 456
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 36 TVSSFSPVTFISSHTYSIHLFFGSPLPSHPSAFIVIISVGKNASPSA 176
++S+ S S YS+ FF S L +HP+A + G A+ +A
Sbjct: 187 SISAVSAAAAAMSLCYSMIAFFASVLKAHPAA-AAAVDYGFKATTAA 232
>04_04_1033 -
30269639-30269734,30269838-30270257,30270450-30270662,
30271071-30271949
Length = 535
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 169 LQLFYHGCTSKLILDTVHS 225
LQL YHG S LI D HS
Sbjct: 193 LQLGYHGTQSHLIKDICHS 211
>01_03_0021 + 11720744-11720898,11720991-11721246
Length = 136
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 130 AEGWEGRGEPKKRWME 83
A G +GRGE K+RW +
Sbjct: 9 ATGGDGRGEAKERWQQ 24
>01_01_0834 + 6522709-6523452
Length = 247
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 22 HLCKPPCLHSALLLSYLP 75
HL PP LH++LLL LP
Sbjct: 62 HLPSPPPLHASLLLPELP 79
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 167 RSVLAYGND-DYEG*GMGGERRAKEKMDGVRV--GRYESNRAE*RHGGLQRCIKE 12
R VL +G+ D +G G G+R AKE +G + R E + + L R KE
Sbjct: 175 REVLRFGSSGDGDGLGRDGKRLAKEGENGAKAEESRVEKAKRKAEEKRLARLEKE 229
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 167 RSVLAYGND-DYEG*GMGGERRAKEKMDGVRV--GRYESNRAE*RHGGLQRCIKE 12
R VL +G+ D +G G G+R AKE +G + R E + + L R KE
Sbjct: 175 REVLRFGSSGDGDGLGRDGKRLAKEGENGAKAEESRVEKAKRKAEEKRLARLEKE 229
>07_01_1103 + 10141766-10143583
Length = 605
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 148 EMMTMKAEGWEGRGEPKKRWMEYVWEDMKVTGLNED 41
+M+T+ AE + G M+Y W D + +N D
Sbjct: 332 DMITLPAEEGDAAGGAALASMDYSWADFEFPEINMD 367
>04_04_1397 -
33230416-33230742,33230852-33231007,33231130-33231543,
33234177-33234307,33235076-33235202,33235709-33236209,
33237624-33237935,33238690-33238719
Length = 665
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 142 MTMKAEGWEGRGEPKKRWMEYVWEDMKVTGLNEDTVA 32
+T K W + +K + + W + K TGL DTV+
Sbjct: 64 VTKKQVKWRW-AKSRKNFGMWTWLESKATGLGRDTVS 99
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 25.4 bits (53), Expect = 9.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 90 HLFFGSPLPSHPSAF 134
HL++ P P HP+A+
Sbjct: 51 HLYYHGPFPQHPNAY 65
>01_06_1638 +
38812226-38812660,38812989-38813063,38813180-38813284,
38813387-38813472,38813554-38813674,38813761-38813840,
38814005-38814067,38814205-38814326,38814429-38814514,
38814626-38814750,38814883-38814911,38815188-38815333,
38815643-38815822,38816445-38816585
Length = 597
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 1 ARGSSFIHLCKP-PCLHSAL 57
ARG +++H CKP P +H L
Sbjct: 300 ARGMTYLHQCKPDPIIHCDL 319
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,759,361
Number of Sequences: 37544
Number of extensions: 162384
Number of successful extensions: 512
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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