Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_B09
(313 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358757-1|AAQ89117.1| 300|Homo sapiens PKD1L1 protein. 30 1.7
AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppres... 30 1.7
AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein... 30 1.7
AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein. 30 1.7
AB209707-1|BAD92944.1| 1720|Homo sapiens low density lipoprotein... 30 1.7
AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein. 30 1.7
BC041974-1|AAH41974.1| 257|Homo sapiens SPON1 protein protein. 29 2.9
BC019825-1|AAH19825.1| 259|Homo sapiens SPON1 protein protein. 28 5.0
BC011775-1|AAH11775.1| 360|Homo sapiens non imprinted in Prader... 28 5.0
BC000957-1|AAH00957.3| 294|Homo sapiens NIPA2 protein protein. 28 5.0
AY732242-1|AAU34000.1| 360|Homo sapiens hypothetical protein pr... 28 5.0
AK096305-1|BAC04757.1| 360|Homo sapiens protein ( Homo sapiens ... 28 5.0
AC007954-1|AAF62556.1| 810|Homo sapiens unknown protein. 28 6.7
AC007375-1|AAF63182.1| 806|Homo sapiens unknown protein. 28 6.7
AK074803-1|BAC11217.1| 807|Homo sapiens protein ( Homo sapiens ... 27 8.8
AB018305-1|BAA34482.2| 724|Homo sapiens KIAA0762 protein protein. 27 8.8
>AY358757-1|AAQ89117.1| 300|Homo sapiens PKD1L1 protein.
Length = 300
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 22 HLCKPPCLHSALLLSYLPTRTPSI 93
HLCKPP SAL+ +PT +P +
Sbjct: 115 HLCKPPRPFSALIEDSIPTCSPEV 138
>AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppressor
protein protein.
Length = 1537
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 289 DCC-ASDRRETAATSEMDVWRDKNGQCQE*VWKC 191
DC SD R + D +R NGQC WKC
Sbjct: 863 DCADGSDERNCETSCSKDQFRCSNGQCIPAKWKC 896
>AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein
receptor related protein-deleted in tumor protein.
Length = 4599
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 289 DCC-ASDRRETAATSEMDVWRDKNGQCQE*VWKC 191
DC SD R + D +R NGQC WKC
Sbjct: 3539 DCADGSDERNCETSCSKDQFRCSNGQCIPAKWKC 3572
>AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein.
Length = 1126
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 289 DCC-ASDRRETAATSEMDVWRDKNGQCQE*VWKC 191
DC SD R + D +R NGQC WKC
Sbjct: 397 DCADGSDERNCETSCSKDQFRCSNGQCIPAKWKC 430
>AB209707-1|BAD92944.1| 1720|Homo sapiens low density
lipoprotein-related protein 1B variant protein.
Length = 1720
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 289 DCC-ASDRRETAATSEMDVWRDKNGQCQE*VWKC 191
DC SD R + D +R NGQC WKC
Sbjct: 660 DCADGSDERNCETSCSKDQFRCSNGQCIPAKWKC 693
>AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein.
Length = 2849
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 22 HLCKPPCLHSALLLSYLPTRTPSI 93
HLCKPP SAL+ +PT +P +
Sbjct: 2388 HLCKPPRPFSALIEDSIPTCSPEV 2411
>BC041974-1|AAH41974.1| 257|Homo sapiens SPON1 protein protein.
Length = 257
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 225 RMDSVKNEFGSAPVVEKLKEK----RSCLRK**L*RLRDGRGEESQRKD 91
RM ++ +FG AP E ++ K R CLR + +LR ESQR +
Sbjct: 143 RMIQMEPQFGGAPCPETVQRKKCRIRKCLRNPSIQKLRWREARESQRSE 191
>BC019825-1|AAH19825.1| 259|Homo sapiens SPON1 protein protein.
Length = 259
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 225 RMDSVKNEFGSAPVVEKLKEK----RSCLRK**L*RLRDGRGEESQRKD 91
RM ++ +FG AP E ++ K R CLR + +LR ES+R +
Sbjct: 145 RMTQMEPQFGGAPCPETVQRKKCRIRKCLRNPSIQKLRWREARESRRSE 193
>BC011775-1|AAH11775.1| 360|Homo sapiens non imprinted in
Prader-Willi/Angelman syndrome 2 protein.
Length = 360
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 3 TRVFFYTSL*ATVSSFSPVTFISSHTYSI-HLFFGSPLPSHPSAFIVIISV 152
T + Y ++ + + +FS V+ + +I LF G P+ HP A+I+++S+
Sbjct: 176 TNILVYITICSVIGAFS-VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSL 225
>BC000957-1|AAH00957.3| 294|Homo sapiens NIPA2 protein protein.
Length = 294
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 3 TRVFFYTSL*ATVSSFSPVTFISSHTYSI-HLFFGSPLPSHPSAFIVIISV 152
T + Y ++ + + +FS V+ + +I LF G P+ HP A+I+++S+
Sbjct: 110 TNILVYITICSVIGAFS-VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSL 159
>AY732242-1|AAU34000.1| 360|Homo sapiens hypothetical protein
protein.
Length = 360
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 3 TRVFFYTSL*ATVSSFSPVTFISSHTYSI-HLFFGSPLPSHPSAFIVIISV 152
T + Y ++ + + +FS V+ + +I LF G P+ HP A+I+++S+
Sbjct: 176 TNILVYITICSVIGAFS-VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSL 225
>AK096305-1|BAC04757.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ38986 fis, clone NT2RI2005814. ).
Length = 360
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 3 TRVFFYTSL*ATVSSFSPVTFISSHTYSI-HLFFGSPLPSHPSAFIVIISV 152
T + Y ++ + + +FS V+ + +I LF G P+ HP A+I+++S+
Sbjct: 176 TNILVYITICSVIGAFS-VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSL 225
>AC007954-1|AAF62556.1| 810|Homo sapiens unknown protein.
Length = 810
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 160 TLLLQLFYHGCTSKLILDTVHSYHATRPSLMLQ 258
T L LF+ T +I++T+ Y+ TRP LQ
Sbjct: 419 TFLFFLFFFLTTPAIIMNTIDMYNVTRPIEKLQ 451
>AC007375-1|AAF63182.1| 806|Homo sapiens unknown protein.
Length = 806
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 160 TLLLQLFYHGCTSKLILDTVHSYHATRPSLMLQ 258
T L LF+ T +I++T+ Y+ TRP LQ
Sbjct: 415 TFLFFLFFFLTTPAIIMNTIDMYNVTRPIEKLQ 447
>AK074803-1|BAC11217.1| 807|Homo sapiens protein ( Homo sapiens
cDNA FLJ90322 fis, clone NT2RP2001755, highly similar to
Rattus norvegicus f-spondin mRNA. ).
Length = 807
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 225 RMDSVKNEFGSAPVVEKLKEK----RSCLRK**L*RLRDGRGEESQRKD 91
RM ++ +FG AP E ++ K R CLR + +LR ES+R +
Sbjct: 693 RMIQMEPQFGGAPCPETVQRKKCRIRKCLRNPSIQKLRWREARESRRSE 741
>AB018305-1|BAA34482.2| 724|Homo sapiens KIAA0762 protein protein.
Length = 724
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 225 RMDSVKNEFGSAPVVEKLKEK----RSCLRK**L*RLRDGRGEESQRKD 91
RM ++ +FG AP E ++ K R CLR + +LR ES+R +
Sbjct: 610 RMIQMEPQFGGAPCPETVQRKKCRIRKCLRNPSIQKLRWREARESRRSE 658
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,293,875
Number of Sequences: 237096
Number of extensions: 858516
Number of successful extensions: 2435
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2435
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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