Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B09
         (313 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   2.6  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   3.5  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   4.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   6.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    20   6.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   8.0  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 172 EGEAFLPTEMMTMKAEGWEGRGEPKKR 92
           E E  L  +++  +A+G++ R EP+K+
Sbjct: 517 ESEFRLQADIILKRADGFKIRLEPRKQ 543


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 219 DSVKNEFGSAPVVEKLKEKR 160
           + + NE      +EKLKE+R
Sbjct: 93  EKISNELNEMCPLEKLKERR 112


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +1

Query: 190 CTSKLILDTVHSYHATRP 243
           C+   ++  +++YH +RP
Sbjct: 46  CSRNSLMTHIYTYHKSRP 63


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 105 SPLPSHPSAFIVIIS 149
           SP PS PS+F   +S
Sbjct: 90  SPSPSSPSSFFSSVS 104


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 91  WMEYVWEDMK 62
           W+E+ W+D K
Sbjct: 72  WLEHEWQDHK 81


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 44  FIQPCYFH 67
           FI+P YFH
Sbjct: 455 FIEPIYFH 462


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,263
Number of Sequences: 438
Number of extensions: 1704
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6595479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)