Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B08
         (477 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8JRX8 Cluster: Putative uncharacterized protein PhopGV...    35   0.81 
UniRef50_UPI00006CF1E7 Cluster: hypothetical protein TTHERM_0053...    34   1.9  
UniRef50_Q4S752 Cluster: Chromosome 14 SCAF14723, whole genome s...    32   7.5  
UniRef50_Q8STS4 Cluster: Putative uncharacterized protein ECU09_...    32   7.5  
UniRef50_A5K2Z3 Cluster: Putative uncharacterized protein; n=1; ...    31   10.0 

>UniRef50_Q8JRX8 Cluster: Putative uncharacterized protein
           PhopGV081; n=1; Phthorimaea operculella
           granulovirus|Rep: Putative uncharacterized protein
           PhopGV081 - Phthorimaea operculella granulovirus
          Length = 162

 Score = 35.1 bits (77), Expect = 0.81
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = -2

Query: 230 CPQGDKSVSRFQTNDIPIYPST--YEIRCFKVIHAITLV 120
           CP G+++V +F TNDI  +  T  Y I C + I+A+TL+
Sbjct: 87  CPDGEQAVIKFTTNDIQSFNETGEYNISCTR-INALTLI 124


>UniRef50_UPI00006CF1E7 Cluster: hypothetical protein
           TTHERM_00538920; n=2; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00538920 - Tetrahymena
           thermophila SB210
          Length = 467

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 23/67 (34%), Positives = 29/67 (43%)
 Frame = -1

Query: 462 TSAPDPGPLTNNKCSPCTICPVVACWMQRGLAAFIRATCIPPIAYGLNPYKMSSLHQKNV 283
           +  PD  PL         IC VV C  Q   +    AT +P    GL  YK     QK++
Sbjct: 384 SETPDKAPLVGTVSPSSKICYVVGCNAQGQSSLTYCATLVP----GLLGYKKLDSDQKDI 439

Query: 282 VCLTTIR 262
           + L TIR
Sbjct: 440 MKLVTIR 446


>UniRef50_Q4S752 Cluster: Chromosome 14 SCAF14723, whole genome
            shotgun sequence; n=4; Percomorpha|Rep: Chromosome 14
            SCAF14723, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 2583

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -1

Query: 468  LSTSAPDPGPLTNNKCSPCTICPVVACWMQRGLAAFI--RATCIPPIAYGLNPY 313
            +S S  D G ++ + CS CT+ P   C++    A F+   ++ +P +     PY
Sbjct: 1415 ISASKGDQGLISCSSCSTCTLSPACPCFLPAEEAGFLIHISSALPRLFRSTGPY 1468


>UniRef50_Q8STS4 Cluster: Putative uncharacterized protein
           ECU09_0880; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU09_0880 - Encephalitozoon
           cuniculi
          Length = 655

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 339 PIAYGLNPYKMSSLHQKNVV-CLTTIRSILVYIPG 238
           PI   L  Y   S+  KN+V C   +RS+L YIPG
Sbjct: 168 PIFARLTTYVTHSVLDKNIVACCIALRSVLTYIPG 202


>UniRef50_A5K2Z3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1185

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +3

Query: 132 SMYYFKTSNFICRWINRNIVSLKT*DTFISLRTIEIRECRLKWSVSLLGIPHFSDAN*TF 311
           S Y FK SN  CR ++RN+V+ +  D     R+ +     L   + LL + H    N  F
Sbjct: 717 SDYIFKQSNVFCRVVSRNLVTYEPVDNTFKRRSEKTHLLNLAIQIHLLTL-HVRFGNIVF 775

Query: 312 Y 314
           +
Sbjct: 776 F 776


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,665,473
Number of Sequences: 1657284
Number of extensions: 10078939
Number of successful extensions: 20124
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20122
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)