Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_B07
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 38 0.001
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 36 0.005
SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 33 0.028
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 32 0.049
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 32 0.065
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 31 0.11
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.20
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.34
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 29 0.34
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.34
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 29 0.46
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.60
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 29 0.60
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 28 0.80
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.1
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.4
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 1.4
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 27 1.8
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 2.4
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 27 2.4
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 2.4
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 26 3.2
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 26 3.2
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 26 3.2
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 4.2
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 26 4.2
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 4.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 4.2
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 4.2
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 5.6
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 25 5.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 5.6
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 7.4
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 25 7.4
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 7.4
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 7.4
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 25 7.4
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 9.8
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 25 9.8
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 9.8
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 25 9.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 37.9 bits (84), Expect = 0.001
Identities = 31/101 (30%), Positives = 50/101 (49%)
Frame = +3
Query: 18 ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN 197
I + A +NS + E LKE S + ++ EL+N L+ + + K E Q + Q+
Sbjct: 463 IEQDLRACLNSSSNE-----LKEKSALIDKKDQELNN-LREQIKEQK-KVSESTQSSLQS 515
Query: 198 LERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA 320
L+R + + +K H E Q L +LQT I N+ S L+
Sbjct: 516 LQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLS 556
Score = 30.3 bits (65), Expect = 0.20
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +3
Query: 57 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP 236
TE+++ +L+EG + ++++ELS+ L+ A K K L Q + R ED+ K
Sbjct: 1361 TENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATNKLKNQLDHLNQEI-RLKEDVLK--- 1414
Query: 237 DVEKQATALHEKL--QTAIQNTLKESQNLAKEVGVNMDQTSQK 359
+ E +L E L Q +++L +++N E+ +D TS+K
Sbjct: 1415 EKESLIISLEESLSNQRQKESSLLDAKN---ELEHMLDDTSRK 1454
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 35.5 bits (78), Expect = 0.005
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Frame = +3
Query: 60 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP- 236
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 237 --DVEKQATALHE--KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKH 404
++ T L + LQ ++N L+ KE M++ + L KL AA D ++
Sbjct: 880 VLQLQSNITELKQDITLQRTVRNQLEIQTTELKERLKFMEERQENLQSKLIAANKDTTQN 939
Query: 405 AEEVQ 419
+ V+
Sbjct: 940 PDNVE 944
Score = 24.6 bits (51), Expect = 9.8
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Frame = +3
Query: 51 KNTESLNKALKEGSDSMVQQVSELS--NSLQGALTDANGKAKEVLQQARQNLERT----V 212
K E LN +L + + +E+ + + + N + K Q ER +
Sbjct: 1295 KEVEKLNASLNPLQTEINELKAEIGAKTASLNLMKEYNSRWKLRFQSVLNKYERVDPTQL 1354
Query: 213 EDLRKAHPDVEKQATALHEKLQTAIQ--NTLKESQNLAKEVGVNMDQTSQKLAPK---LK 377
E+L+K +EK+ L KLQ + +T K+ N E N+ + ++ K L
Sbjct: 1355 EELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLA 1414
Query: 378 AAYDD 392
AA+++
Sbjct: 1415 AAWNE 1419
>SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 33.1 bits (72), Expect = 0.028
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 13/124 (10%)
Frame = +3
Query: 36 AIVNSKNTESLNKALKEGSDSMVQQVSELS---------NSLQGALTDANGKAKEVLQQA 188
A + S T+SLN+A + V QV+E S N LQ +N K + + +
Sbjct: 193 AALISNETDSLNQATLAVPEEPVIQVTEASVPSFVSQQENQLQDEALTSNSKNADAIGAS 252
Query: 189 RQNLERTVED----LRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQ 356
N+ + + + HPDV+ QA+ + +T + K GVN DQT Q
Sbjct: 253 DANVATAPKSWADLIARNHPDVKSQAS---------VSSTASTTGQTVK--GVNADQTQQ 301
Query: 357 KLAP 368
AP
Sbjct: 302 PTAP 305
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 32.3 bits (70), Expect = 0.049
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Frame = +3
Query: 6 RQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGA------------LT 149
R + QF A N+K E + +EG D+ +QVS L L+ A
Sbjct: 92 RDEKHKRQFEATENAKRKEEIEAQYREGYDTAQKQVSSLVRFLRFASHNCVHPSDDAPFN 151
Query: 150 DANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQN 293
A K ++ + + E+ V DL + DV ++ + + + + N
Sbjct: 152 SAVEKLLVIVYEGTEKSEKAVADLNDSSTDVVPESEVSFQTISSRVDN 199
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 31.9 bits (69), Expect = 0.065
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Frame = +3
Query: 21 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 176
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 177 LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKESQ---NLAKEVGVNM 341
LQQ R NLER +D+ +E+ A EK + +QN +K S+ N A G+N
Sbjct: 247 LQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN-VKTSEIPINAADLEGIN- 304
Query: 342 DQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAAT 443
+ + ++++ D E Q+ E A+
Sbjct: 305 PELLPVIEEEIRSFRDQSAMKKREKQRSKDEYAS 338
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 31.1 bits (67), Expect = 0.11
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = +3
Query: 162 KAKEVLQ---QARQNLERTVEDLRK---AHPD-VEKQATALHEKLQTAIQNTLKESQNLA 320
K KE ++ Q ++ LER VE+LRK + D VE +A + + + E Q L
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 321 KEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 440
K++ T QKL K++ + H ++Q +E+A
Sbjct: 188 KDMEQENASTIQKLTSKIRELQASQLDH--DLQASQNESA 225
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.20
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = +3
Query: 78 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 248
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 249 Q------ATALHEKLQTAIQNTLKESQNLAKEVGV 335
+ A + +KL+ L++ ++L KE+ +
Sbjct: 1065 ELLRHADARSTLQKLREDYTKALEQVEDLNKEIAL 1099
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 99 MVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 278
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.5 bits (63), Expect = 0.34
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 233 PRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETGAKTESGIR 388
P R ++ ++RE NR T+ G + HGS LT+TG + ++
Sbjct: 15 PSRASSNTHLSREGTNRSSNVTRTV----SGRKSNHGSSLTDTGESDQLSLK 62
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 29.5 bits (63), Expect = 0.34
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 162 KAKEVLQQARQNLERTVEDLRKAHP--DVEKQATALHEKLQTAIQNTLKESQNLAKEVGV 335
KAK L+ ++LE D +A VEKQ +++E+L+ + + +E
Sbjct: 636 KAKGGLEVNAEDLEHLDADKLRAMQIEQVEKQNKSMNERLRVIGKRIDHLERAYRREAIP 695
Query: 336 NMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATKQ*RA 458
++ +++ A + + + K +EVQ++ HE A K +A
Sbjct: 696 LWEEDAKQQAEHDREIFYEREKQRKEVQERKHEQAIKDKKA 736
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.34
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 177 LQQARQNLERTVEDLRKAHPDVEK 248
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 29.1 bits (62), Expect = 0.46
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +3
Query: 42 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 221
+N S++ L + D + S + NG A+E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 222 RKAHPDVEKQATALHE----KLQTAIQNTLKESQNLA 320
RKA D+E++ L + KL +N + LA
Sbjct: 86 RKARLDLEEENDDLDKIGALKLHVVSENNFPTAAGLA 122
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.7 bits (61), Expect = 0.60
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = +2
Query: 38 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 217
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 218 SPQGAPRRRETSHRITREAANRHP---EHTKGEPEPGE 322
+ + ET H ++ P +H + E P +
Sbjct: 726 ESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLPSQ 763
Score = 28.3 bits (60), Expect = 0.80
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +2
Query: 125 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 295
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 296 TKGEPEPGE 322
T+ E P +
Sbjct: 723 TRQESLPSQ 731
Score = 24.6 bits (51), Expect = 9.8
Identities = 22/80 (27%), Positives = 31/80 (38%)
Frame = +2
Query: 50 KEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQG 229
KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 709 KESTPSKQPTEGQ---HTRQESLPSQQTTETKHLRKE----SIPSKQPTEGQHARQESLP 761
Query: 230 APRRRETSHRITREAANRHP 289
+ + ET H ++ P
Sbjct: 762 SQQTTETKHLRKESIPSKQP 781
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 28.7 bits (61), Expect = 0.60
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 108 QVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE------KQATALHE 269
Q +E SN+ A ++ + + +E L L TV + R + + + A+ ++E
Sbjct: 550 QSNETSNTFPAASSNISSQLRE-LHTKIDELRETVSNFRADYNSIRTSLNQLEAASGINE 608
Query: 270 KLQTAIQNTLKESQNLAKEVGVNMDQTS 353
++QT ++L S ++ G QTS
Sbjct: 609 RIQTTSADSLLNSNGMSGTEGFENTQTS 636
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 28.3 bits (60), Expect = 0.80
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 69 NKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD--- 239
++ L+E ++ +E L + +A KA++ L+Q + E L K H +
Sbjct: 28 DRFLQEERKKLLNNKNEYLRQLS-EINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAI 86
Query: 240 VEKQATALHEKLQTAIQNTLKESQNL 317
E++ + EKL ++ K S+ L
Sbjct: 87 TEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 51 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 209
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 196 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 77
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.5 bits (58), Expect = 1.4
Identities = 25/133 (18%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Frame = +3
Query: 57 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN----LERTVEDLR 224
TE+ + L + + ++ +++++L N+ Q + + K + + LE+T+EDL+
Sbjct: 875 TETKHDILAQRNRNVSEKMNDLENAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLK 934
Query: 225 KAHPDVEKQATALHEKLQTAIQNTLKESQN---LAKEVGVNMDQTSQKLAPKLKAAYDDF 395
A D K L + + + + T K + L +E + +D+ + + ++
Sbjct: 935 LALQDELKNRNLLMDDISSYNKQTTKLQEKIKWLERERSILIDELESYRSNQFN-YQNNL 993
Query: 396 VKHAEEVQKKVHE 434
V+ E+++++ E
Sbjct: 994 VQDKNELEERLKE 1006
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +3
Query: 180 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 311
++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 2.4
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 18 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 188
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 201 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKES 308
ERT E + A D+EKQ + H++ Q+++ + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 42 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 137
V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 184 VKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 26.2 bits (55), Expect = 3.2
Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 3/119 (2%)
Frame = +3
Query: 42 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 221
V KN + + K L+ G+D + + ++ N + K+ AR L + D
Sbjct: 441 VTQKNAKLVAKLLRNGADPAMLNGN---GKTPFEISTGNKEVKDEFLIARHELGESFFDW 497
Query: 222 RKAH---PDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYD 389
A P +Q +K +T ++N ++ + ++ + + QK+ + K YD
Sbjct: 498 EAAKVGAPQSREQIQKQRQKAKTKLENQRRDKE---RQEELRRKEAMQKIEEQSKRDYD 553
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 26.2 bits (55), Expect = 3.2
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 15 TISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVLQQAR 191
T Q + I+ ++ +ES + A SM + S+S A NG+AKE ++ R
Sbjct: 430 TTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETPEEKR 487
Query: 192 QNLERTVED 218
++T ED
Sbjct: 488 ARKKKTKED 496
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 3.2
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = +3
Query: 39 IVNSKNTESLNKALKEGSDSMVQQVSE-LSNSLQGALTDANGKAKEVLQQARQNLERTVE 215
+V S N +LNK +E SDS+ Q S + NSL +L+ ++ +R NL+ +
Sbjct: 109 LVGSSN--ALNKPTRE-SDSLKHQKSHPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSR 165
Query: 216 DLRKAHPDVEKQATALHEK----LQTAIQNTLKESQNLAKE 326
A D + A L L++A++N L+ + K+
Sbjct: 166 WDNTADNDSQIDAQDLSRSTPSPLRSAMENVLQSLNAMGKK 206
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 4.2
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Frame = +3
Query: 51 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKA 230
+ + L+ S+ +++ N++ ALT A + Q E+T++DL +
Sbjct: 53 EGAQPLSSQSSRSSNYTNVKITATQNNVD-ALTGAPIRIVTTTNARIQPDEKTLQDLLEQ 111
Query: 231 HPDVEKQATALHEKLQTAIQ-NTLKESQNLAKEVGVNMDQTSQKLA-PKLKAAYDDFVKH 404
++A E+LQ A Q N S+ L E +LA + + A +
Sbjct: 112 RQVALREAREAEEELQRARQYNDRSTSEALELEARAKKAAQDAELASERAREAQSSIERS 171
Query: 405 AEEVQKKVHEAATKQ*RAL 461
A +K+ E A + AL
Sbjct: 172 ASLREKQAREEAERAATAL 190
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.8 bits (54), Expect = 4.2
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Frame = +3
Query: 72 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP----D 239
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATPAAVAP 88
Query: 240 VE-KQATALHEKLQTAIQNTLK---ESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHA 407
VE A E + + N K +Q N+ Q +Q+ ++K + +
Sbjct: 89 VEATSAVDTSEAVASMTPNKRKARDPAQPKRPPSAYNLFQKNQR--SEIKESLGEKSNDV 146
Query: 408 EEVQKKVHE 434
+EV K +HE
Sbjct: 147 KEVNKAMHE 155
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 156 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 284
N +K L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 207 TVEDLRKAHPDVEKQATALHEKLQTAIQNT-LKESQNLAKEVGVNMDQTSQKLAPKLKAA 383
++ED + P ++ K + QN K++ K+ G+N +QTS + P ++
Sbjct: 1551 SLEDSNRQKPFNGEKFRRFSSKSRRGSQNRDSKKTGKARKDKGINNNQTSPQNKPSKESL 1610
Query: 384 YDDFVKHAEEV 416
D + + ++V
Sbjct: 1611 KSDTISNEKKV 1621
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 144 LTDANGKAKEVLQQARQN 197
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 5.6
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 66 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 245
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 246 KQATALHEKLQTAI-QNTLKES-QNLAKEV 329
++A + + I Q+ LK + +NL V
Sbjct: 64 QEAVRCVAIISSKIPQDKLKSTVENLLSGV 93
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 25.4 bits (53), Expect = 5.6
Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Frame = +3
Query: 33 NAIVNSKNTESLNKAL--KEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQAR-QNLE 203
N + K ES N+ ++ S S Q+ + + NS +T A+ +K+ A +
Sbjct: 11 NVMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGFD 70
Query: 204 RTVEDLRKAHPDVEKQATALHEK------LQTAIQNTLKESQNL--AKEVGVNMDQTSQK 359
+ ++ A + + + L K ++ I++ K ++L A+E + +
Sbjct: 71 EFYDSMKSAERE-QMELKRLESKDRRPKYMENLIESAKKRKRDLLLARERALLKKNELEG 129
Query: 360 LAPKLKAAYDDFVKHAEEVQKKVHE 434
K + KH EEVQK + +
Sbjct: 130 DDATEKFVTSSYKKHREEVQKAIED 154
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.4 bits (53), Expect = 5.6
Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Frame = +3
Query: 81 KEGSDSMVQQVSELSNSLQGALTDANG------KAKEVLQQARQNLERTVEDLRKAHPDV 242
KE SD + + E+ N L+ L+ + + Q N+ ++ + ++ D
Sbjct: 410 KENSDYLKTEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANIT-SINERKENLTDK 468
Query: 243 EKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTS 353
K KL+++I+N + K +G MD+ +
Sbjct: 469 RKSLWREEAKLKSSIENVKDDLSRSEKALGTTMDRNT 505
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 217 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 68
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 243 EKQATALHEKLQTAIQNTLKE--SQ-NLAKEVGVNMDQTSQKLAPKLKAAYD 389
EKQ HEK+ ++ LKE SQ N AK++ ++ +Q + K+ ++
Sbjct: 234 EKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDILDKMNDEFN 285
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 12 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 131
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 199 WSAQSRISARRTPTSRNKPPHYTRSCKPP 285
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 7.4
Identities = 24/134 (17%), Positives = 46/134 (34%)
Frame = +3
Query: 9 QKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA 188
+KT Q I L K + M S+++ + + N V Q
Sbjct: 260 EKTSDIQDRKIKTPIKPSLLGKIRSSVNKGMTDVASQVNRGMTDVASQVNKGVNGVASQV 319
Query: 189 RQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAP 368
+ + + K V Q KL+ K+ +NL K +G + + +
Sbjct: 320 NKGMNGVANQVNKGVTGVASQVRKPVGKLE-------KKFENLEKSIGDTLKSSIRSSPK 372
Query: 369 KLKAAYDDFVKHAE 410
K + +DF ++ +
Sbjct: 373 SKKRSREDFEENED 386
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = -1
Query: 289 WMAVCSFSCNAVACFSTSGCALRRSSTVRSKFWRACWSTSL 167
W+ + S + F T+G R S + FWR + +
Sbjct: 105 WIVISSILAQVLLFFMTTGAVRRYSMMLCFFFWRISYDAGI 145
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 24.6 bits (51), Expect = 9.8
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 60 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 239
E + A E S++Q++SEL +QG L +++ RQ+ + ++ L++ +
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLEN--PDLIAALRQDKGQNLQHLQEHYNI 136
Query: 240 VEKQATALHEKLQ 278
++ L++ Q
Sbjct: 137 TPERIAVLYKFAQ 149
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +2
Query: 179 PTSSP--ELGAHSRGSPQG 229
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 24.6 bits (51), Expect = 9.8
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +3
Query: 168 KEVLQQARQNLERTVEDLRK-AHPDVEKQATALHEKLQTAIQ-NTLKESQNLAK---EVG 332
K + ++ R L +T R PD +K + HE++ Q + L+E + + E G
Sbjct: 242 KRMSKEERNLLNKTKAFARLLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTTLEQG 301
Query: 333 --VNMDQTSQKLAPKLKAAYDDFVKHAE 410
D+T + L K A+YD ++H +
Sbjct: 302 HKYERDKTQKFLLSKASASYDKQLRHVK 329
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,967,536
Number of Sequences: 5004
Number of extensions: 34451
Number of successful extensions: 198
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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