Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B06
         (442 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...   137   2e-34
AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative odorant-b...    25   1.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   1.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   2.1  
DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    24   2.8  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    24   2.8  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    24   2.8  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    22   8.4  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score =  137 bits (331), Expect = 2e-34
 Identities = 69/144 (47%), Positives = 92/144 (63%), Gaps = 1/144 (0%)
 Frame = +3

Query: 9    LARRTVHNCVRCSRYKPKYIQPIMDDLPKERAQLEFPFLHTGVDYAGPVLILDRKGRGSK 188
            +A+RTV NCV+C+R +PK IQ  M DLP++R +   PF  +GVDYAGP+++     R   
Sbjct: 1385 VAKRTVFNCVKCTRCRPKLIQQPMADLPEQRVRQARPFSISGVDYAGPIMVKGTHRRAVP 1444

Query: 189  LTSSYICVFVCFAVKAVHLELVTDLTKDAFIAALNRFIGRRGKPQTISSDNATTFLGAYN 368
             T  YI +FVCF  KAVH+ELV++LT  AF+AAL RF+ RRG    + SDN T F GA N
Sbjct: 1445 -TKGYISIFVCFVTKAVHIELVSNLTSSAFLAALRRFVARRGHVTELHSDNGTNFRGANN 1503

Query: 369  DLQMFFKCY-SDNIKIEMHNQCIE 437
             L+  +K   SD  + E+   C E
Sbjct: 1504 KLRELYKLLNSDTHQDEVVGWCAE 1527


>AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative
           odorant-binding protein OBPjj12 protein.
          Length = 119

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = +3

Query: 168 RKGRGSKLTSSYICVFVCFAVKAVHLELVTDLTKDAFIAALNRFIGRR--GKPQTISSDN 341
           R G  S   S   C   CF  +A  +       +D  +   NRF+ +    K   I +DN
Sbjct: 32  RAGNFSVRNSLVECFGECFVKRAGFMNDNFTFNRDTIMRFTNRFVSKEISEKVYNICTDN 91

Query: 342 AT-TFLGAYNDLQMFFKCYSDNI 407
            T T+     D+   ++C  +N+
Sbjct: 92  VTPTYCVTAFDV---YQCIYENV 111


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 63  YIQPIMDDLPKERAQLEFPFLHTGVD 140
           +++   D + K+R +L F FLH  +D
Sbjct: 228 HLKVCFDKITKQRGRLPFKFLHIKLD 253


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 216 VCFAVKAVHLELVTDLTKDAFIAALNR 296
           +C A +   L L+TDL + +F+AA +R
Sbjct: 315 ICLAARE-RLRLITDLQERSFVAADHR 340


>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
          polypeptide protein.
          Length = 161

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 63 ILVYT*NNEHSCVPYASP 10
          +L++T  N H   PYA P
Sbjct: 12 VLIFTLQNAHCACPYAHP 29


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
          polypeptide protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 63 ILVYT*NNEHSCVPYASP 10
          +L++T  N H   PYA P
Sbjct: 12 VLIFTLQNAHCACPYAHP 29


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
          polypeptide protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 63 ILVYT*NNEHSCVPYASP 10
          +L++T  N H   PYA P
Sbjct: 12 VLIFTLQNAHCACPYAHP 29


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 332 RNSLRLTTTADKPVKSCNKRILG*IRDEFQMHRLYS-KTYKNTY 204
           R  + +T +  KPV+   KRI+G   D       ++     NTY
Sbjct: 64  RGDIIITKSPTKPVQHVCKRIIGMPGDRIMTRASFNLNPLSNTY 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,531
Number of Sequences: 2352
Number of extensions: 9045
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)