Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_B06
(442 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 83 7e-17
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 75 3e-14
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 75 3e-14
AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical ... 29 1.5
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 27 6.0
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 27 6.0
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 27 6.0
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 27 6.0
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 27 8.0
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 83.4 bits (197), Expect = 7e-17
Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Frame = +3
Query: 6 RLARRTVHNCVRCSRYKPKYIQ-PIMDDLPKERAQLEFPFLHTGVDYAGPVLILDRKGRG 182
R ++ + CV+C RY ++ P M D+P R + PF +TG+DY GP+ RK G
Sbjct: 864 RQVKKIIGKCVKCQRYNRAPMKYPNMADMPSFRVRRSRPFENTGLDYFGPMTF--RKEDG 921
Query: 183 SKLTSSYICVFVCFAVKAVHLELVTDLTKDAFIAALNRFIGRRGKPQTISSDNATTF 353
S S + CV C + H+ELV + AFI A+ RF+ RG P I SDNA F
Sbjct: 922 ST-ESCWGCVLSCATTRLTHIELVQQCSTKAFINAIRRFVSERGIPDRIVSDNAPQF 977
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 74.5 bits (175), Expect = 3e-14
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +3
Query: 9 LARRTVHNCVRCSRYKPK-YIQPIMDDLPKERAQLEFPFLHTGVDYAGPVLILDRKGRGS 185
+A + + +CV C + K + P LP R + PF H G+DY GP+ K + +
Sbjct: 1762 VAAKVIRSCVVCQKVNAKPFKYPHAKILPGCRTEPSTPFQHVGLDYLGPIAY---KNKDT 1818
Query: 186 KLTSSYICVFVCFAVKAVHLELVTDLTKDAFIAALNRFIGRRGKPQTISSDNATTFL 356
+Y+ ++ C +A LEL+ D T FI +L R G P+TI SDNA TFL
Sbjct: 1819 HF-KAYVLIYTCLVTRAAKLELIPDGTTARFIESLGIIFNRVGVPETIYSDNAQTFL 1874
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 74.5 bits (175), Expect = 3e-14
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +3
Query: 9 LARRTVHNCVRCSRYKPK-YIQPIMDDLPKERAQLEFPFLHTGVDYAGPVLILDRKGRGS 185
+A + + +CV C + K + P LP R + PF H G+DY GP+ K + +
Sbjct: 1762 VAAKVIRSCVVCQKVNAKPFKYPHAKILPGCRTEPSTPFQHVGLDYLGPIAY---KNKDT 1818
Query: 186 KLTSSYICVFVCFAVKAVHLELVTDLTKDAFIAALNRFIGRRGKPQTISSDNATTFL 356
+Y+ ++ C +A LEL+ D T FI +L R G P+TI SDNA TFL
Sbjct: 1819 HF-KAYVLIYTCLVTRAAKLELIPDGTTARFIESLGIIFNRVGVPETIYSDNAQTFL 1874
>AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical
protein Y46E12BL.2 protein.
Length = 1334
Score = 29.1 bits (62), Expect = 1.5
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 153 VLILDRKGRGSKLTSSYICV-FVCFAVKAVHLELVTDLTKDAFIAALNRFIGRRGKPQTI 329
+L+LD+ +S C+ F+C + L+LV D T D AAL + + + TI
Sbjct: 860 ILLLDKDNNVHTRQNSSKCIQFICSKI----LDLVDDPTIDTPSAALEPVLSKLYELTTI 915
Query: 330 SSDNATT 350
S++ TT
Sbjct: 916 SAEQKTT 922
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 201 YICVFVCFAVKAVHLELVT 257
Y+C FV FA+K+V + L+T
Sbjct: 597 YLCFFVVFAIKSVVVRLLT 615
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 201 YICVFVCFAVKAVHLELVT 257
Y+C FV FA+K+V + L+T
Sbjct: 597 YLCFFVVFAIKSVVVRLLT 615
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 201 YICVFVCFAVKAVHLELVT 257
Y+C FV FA+K+V + L+T
Sbjct: 597 YLCFFVVFAIKSVVVRLLT 615
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 201 YICVFVCFAVKAVHLELVT 257
Y+C FV FA+K+V + L+T
Sbjct: 596 YLCFFVVFAIKSVVVRLLT 614
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 26.6 bits (56), Expect = 8.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 274 ASLVKSVTSSRCTAFTAKHTKTHMYDDVSLLPLPFRSSINT 152
AS++ V S CT+ T ++ SLLP+ F I T
Sbjct: 115 ASIISCVIISACTSMRTSVTYLLIFSTYSLLPMSFMLMILT 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,366,160
Number of Sequences: 27780
Number of extensions: 207025
Number of successful extensions: 490
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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