Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B06
         (442 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   0.65 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   0.65 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.0  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           23   2.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   3.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   4.5  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   4.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   4.5  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.9  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 13/58 (22%), Positives = 27/58 (46%)
 Frame = -3

Query: 389 FKKHL*IIISSEKSCRVV*RNSLRLTTTADKPVKSCNKRILG*IRDEFQMHRLYSKTY 216
           FK  + + + + ++C    R + ++   +DK  K   +  LG   DE +   +Y + Y
Sbjct: 481 FKGGMYLRLKARRACMNYERFTYKININSDKETKGMMRIFLGPAFDEIKHDMVYLQKY 538


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 13/58 (22%), Positives = 27/58 (46%)
 Frame = -3

Query: 389 FKKHL*IIISSEKSCRVV*RNSLRLTTTADKPVKSCNKRILG*IRDEFQMHRLYSKTY 216
           FK  + + + + ++C    R + ++   +DK  K   +  LG   DE +   +Y + Y
Sbjct: 481 FKGGMYLRLKARRACMNYERFTYKININSDKETKGMMRIFLGPAFDEIKHDMVYLQKY 538


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -1

Query: 250 SSRCTAFTAKHTKTHMYDDVSLLPLPFRSSINTGPA*STPVCKK 119
           S R    T K     +   VSLLPLP   + +   A ST  CKK
Sbjct: 541 SKRNGGETNKQELKRLKSTVSLLPLPLARTPSVMSASST--CKK 582


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 345 SRCLTK*SAAYHDG 304
           SRC+TK + A HDG
Sbjct: 14  SRCVTKAAIAGHDG 27


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 292 LRAAINASLVKSVTSSRCTAFTAKHTKTHM 203
           L+AA+  S +  + +S CT+ T    K H+
Sbjct: 617 LQAALGDSNMGFLNNSMCTSTTTSPDKEHV 646


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 18  RTVHNCVRCSRYKP 59
           R V   +RC RY+P
Sbjct: 264 RNVKEMIRCLRYRP 277


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 18  RTVHNCVRCSRYKP 59
           R V   +RC RY+P
Sbjct: 135 RNVKEMIRCLRYRP 148


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 18  RTVHNCVRCSRYKP 59
           R V   +RC RY+P
Sbjct: 264 RNVKEMIRCLRYRP 277


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 163 LIEKVEVVSLHHHTYVFL 216
           L  K+    LH HT ++L
Sbjct: 248 LFRKLPFAGLHSHTIIYL 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,398
Number of Sequences: 438
Number of extensions: 2641
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)