Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B04
         (184 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012437-1|AAS93708.1|  175|Drosophila melanogaster RH33661p pro...    33   0.070
AE014297-1021|AAF54437.1|  252|Drosophila melanogaster CG12948-P...    33   0.070

>BT012437-1|AAS93708.1|  175|Drosophila melanogaster RH33661p
           protein.
          Length = 175

 Score = 32.7 bits (71), Expect = 0.070
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 57  MSSPGLTSEAQLRYLLQWFGEFSEVAAERISY 152
           MS   L+ + + RY++QWF E+SE+  +   Y
Sbjct: 1   MSMSNLSIDGEFRYIIQWFNEWSELQRDDFVY 32


>AE014297-1021|AAF54437.1|  252|Drosophila melanogaster CG12948-PA
           protein.
          Length = 252

 Score = 32.7 bits (71), Expect = 0.070
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 57  MSSPGLTSEAQLRYLLQWFGEFSEVAAERISY 152
           MS   L+ + + RY++QWF E+SE+  +   Y
Sbjct: 1   MSMSNLSIDGEFRYIIQWFNEWSELQRDDFVY 32


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,301,408
Number of Sequences: 53049
Number of extensions: 123536
Number of successful extensions: 241
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 24,988,368
effective HSP length: 41
effective length of database: 22,813,359
effective search space used: 433453821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)