Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_B04
(184 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 0.77
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 0.77
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 1.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 1.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 1.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 20 2.4
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 20 3.1
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 20 3.1
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 19 4.1
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 19 4.1
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 19 5.5
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 19 7.2
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 18 9.5
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 0.77
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 14 RHEA*FVSCALKSYNVITRP 73
RHE ++ L SYN + RP
Sbjct: 53 RHEKRLLNELLSSYNTLERP 72
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 0.77
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 14 RHEA*FVSCALKSYNVITRP 73
RHE ++ L SYN + RP
Sbjct: 53 RHEKRLLNELLSSYNTLERP 72
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.0 bits (42), Expect = 1.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 29 FVSCALKSYNVITRPNF*STAKVSPPMVWGV 121
F+ C +K +NV+ N K+S +V V
Sbjct: 62 FIECTMKKFNVVDE-NANFNEKISSDIVRAV 91
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.0 bits (42), Expect = 1.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 71 PNF*STAKVSPP 106
PNF S AK+ PP
Sbjct: 292 PNFLSEAKIFPP 303
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.6 bits (41), Expect = 1.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 8 GIRHEA*FVSCALKSYNVITRP 73
G HE ++ L +YNV+ RP
Sbjct: 20 GGSHEKRLLNDLLDTYNVLERP 41
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 127 SLNSPNHWRRYLSCASEVRPGDD 59
SL+ WR + CA+ P D
Sbjct: 302 SLHGQLLWREFFYCAATKNPNFD 324
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 19.8 bits (39), Expect = 3.1
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = +2
Query: 29 FVSCALKSYNVITRPN 76
+ C LK++N++ + N
Sbjct: 62 YCECILKNFNILDKNN 77
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 4 CRNSARGLICKLCIKVLQCHHQA*LLK 84
C++ CK K+LQC L+K
Sbjct: 103 CKDITESNSCKKSSKLLQCFIDNNLMK 129
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 19.4 bits (38), Expect = 4.1
Identities = 5/12 (41%), Positives = 9/12 (75%)
Frame = +2
Query: 29 FVSCALKSYNVI 64
+V C +K +NV+
Sbjct: 62 YVECMMKKFNVV 73
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 76 VRPGDDIVRL*CTAYKS 26
+ PGD ++ TAYK+
Sbjct: 160 IHPGDPRIKSVVTAYKA 176
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 19.0 bits (37), Expect = 5.5
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = +2
Query: 29 FVSCALKSYNVITRPN 76
+ +C L+ +NV+ + N
Sbjct: 71 YFNCVLEKFNVMDKKN 86
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -1
Query: 145 ILSAATSLNSPNHWR 101
+L A ++ PN+WR
Sbjct: 15 MLMMAIAVELPNNWR 29
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +1
Query: 22 GLICKLCI 45
G+IC LC+
Sbjct: 211 GIICALCL 218
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,646
Number of Sequences: 438
Number of extensions: 643
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used: 2576460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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