Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B03
         (264 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   1.1  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   1.4  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   1.9  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           22   3.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   7.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            21   7.6  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 103 YIIYIYEFLLNYIFFSF 53
           +I +I+ FLL+++ FSF
Sbjct: 52  FINFIFMFLLHFVLFSF 68


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = -2

Query: 230 LNIYSVLFSVVFDIIYLCINAFLFRTKHNIHF*TNVKEKSCSLYYIYLRVFIELYF 63
           LN + +  S++F ++++     +    HN HF   V   +  L +I   +F+ L F
Sbjct: 518 LNSFKMKLSIIFGVVHMIFGVCMSLVNHN-HFNRRV---NILLEFIPQMMFLVLLF 569


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -2

Query: 230 LNIYSVLFSVVFDIIYLCINAFLFRTKHN 144
           LN Y +  S++F ++++     +    HN
Sbjct: 529 LNSYKMKLSIIFGVVHMIFGVCMSVVNHN 557


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 189 YLFMHKCIFIPHKTQHSLLNQC*GKKLFIIL 97
           +L  H C F  H  QH LL     + + ++L
Sbjct: 498 FLLSHWCQFEMHLAQHRLLETRRDELILVLL 528


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 149  HNIHF*TNVKEKSCSLYYIY 90
            H IH+  +VK K   L Y Y
Sbjct: 2030 HEIHYPVSVKGKRFRLRYSY 2049


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 149  HNIHF*TNVKEKSCSLYYIY 90
            H IH+  +VK K   L Y Y
Sbjct: 2031 HEIHYPVSVKGKRFRLRYSY 2050


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,014
Number of Sequences: 2352
Number of extensions: 5270
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 14420043
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)