Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_B03
(264 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 33 0.037
U42843-7|AAA83598.2| 326|Caenorhabditis elegans Serpentine rece... 32 0.049
U00031-1|AAZ82851.1| 330|Caenorhabditis elegans Hypothetical pr... 27 1.4
AF125954-1|AAK68174.1| 340|Caenorhabditis elegans Serpentine re... 27 1.4
AC006769-2|AAF60583.2| 340|Caenorhabditis elegans Hypothetical ... 27 1.4
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 27 1.8
U80023-11|AAG24044.1| 331|Caenorhabditis elegans Seven tm recep... 27 2.4
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 26 3.2
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 26 3.2
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 26 3.2
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 26 4.2
U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine rece... 26 4.2
AC024214-16|ABA00187.1| 343|Caenorhabditis elegans Hypothetical... 26 4.2
U40412-4|AAV28342.1| 618|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z72514-8|CAA96677.3| 416|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z34799-1|CAA84315.1| 147|Caenorhabditis elegans Hypothetical pr... 25 7.4
AF022983-4|AAB69944.1| 387|Caenorhabditis elegans Hypothetical ... 25 7.4
AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine re... 25 7.4
Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z78065-5|CAB01515.1| 954|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF098504-6|ABO52818.1| 300|Caenorhabditis elegans Serpentine re... 25 9.8
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 32.7 bits (71), Expect = 0.037
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = -3
Query: 223 YTPSYFLWCSILFIYA*MHFYSAQNTTFTSKPMLRKKVVHYIIYIYEFLLNYIFFSFLAA 44
+ P FL +ILFI+A +FY + F V+H+ Y + I S
Sbjct: 203 FAPKNFLHLNILFIFAEFNFYQPASLVFVDFGFFSPLVIHFATLYYIMIYPVIPLSIYTV 262
Query: 43 EN 38
N
Sbjct: 263 SN 264
>U42843-7|AAA83598.2| 326|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 5 protein.
Length = 326
Score = 32.3 bits (70), Expect = 0.049
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -2
Query: 260 PDKYENIHTALNIYSVLFSVVFDIIYLCINAFLFRTKHNIHF*TNVKEKSCSLYYIYLRV 81
P ++ T N+YSVL V I+L + +F +R I + ++ L IYL
Sbjct: 77 PCQWLTDRTCFNLYSVLVHVYTHTIWLLLISFCYRYYVMIRSEPSKRQVELLLLIIYLPS 136
Query: 80 FIELYFL*F 54
FI++ L F
Sbjct: 137 FIQMILLFF 145
>U00031-1|AAZ82851.1| 330|Caenorhabditis elegans Hypothetical
protein B0361.4 protein.
Length = 330
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = -2
Query: 257 DKYENIHTALNIYSVLFSVVFDIIYLCINAFLFRTKHNIHF*TNVKEKSCSLYYIYLRVF 78
DKY ++ Y L ++ I +N+F F K HF N S ++Y+ +
Sbjct: 251 DKYLKPSIIVSNYFSLHKIISSIF--AVNSFFFTEKRKAHFHFNFSSSSFHPGFVYVDLK 308
Query: 77 IELY 66
+Y
Sbjct: 309 SSIY 312
>AF125954-1|AAK68174.1| 340|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 60 protein.
Length = 340
Score = 27.5 bits (58), Expect = 1.4
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = -3
Query: 226 IYTPSYFLWCSILFIYA*MHFYSAQNTTFTSKPMLRKKVVHYIIYIYEFLLNYIFFSF 53
+Y P YF CSIL I + FY N TSK + + + Y +Y F NY+ +F
Sbjct: 11 VYYPIYFTSCSILHI---LLFYLIFNK--TSKVL---RTMRYFLYPSNF-FNYVLAAF 59
>AC006769-2|AAF60583.2| 340|Caenorhabditis elegans Hypothetical
protein Y45G12C.7 protein.
Length = 340
Score = 27.5 bits (58), Expect = 1.4
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = -3
Query: 226 IYTPSYFLWCSILFIYA*MHFYSAQNTTFTSKPMLRKKVVHYIIYIYEFLLNYIFFSF 53
+Y P YF CSIL I + FY N TSK + + + Y +Y F NY+ +F
Sbjct: 11 VYYPIYFTSCSILHI---LLFYLIFNK--TSKVL---RTMRYFLYPSNF-FNYVLAAF 59
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -2
Query: 233 ALNIYSVLFSVVFDIIYLCINAFLFRTKHNIHF*TNV 123
+L +++ F V+F I+ I+A L++T IH+ TN+
Sbjct: 390 SLITFALFFYVLFGIVAGYISARLYKTFEGIHWKTNL 426
>U80023-11|AAG24044.1| 331|Caenorhabditis elegans Seven tm receptor
protein 47 protein.
Length = 331
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 149 VLCGIKMHLCINK*YRTPQKIGRSIYSR 232
+ CGIKMHL +N+ ++ + I+ +
Sbjct: 216 IFCGIKMHLVMNQGFKNVSVANKKIHKQ 243
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 2 QRERTYRHVSNNVFRSKETKENIVQ*KLVDI 94
+ +TY N VF+ ET + + KL+D+
Sbjct: 323 ENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 353
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 2 QRERTYRHVSNNVFRSKETKENIVQ*KLVDI 94
+ +TY N VF+ ET + + KL+D+
Sbjct: 2176 ENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 2206
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 2 QRERTYRHVSNNVFRSKETKENIVQ*KLVDI 94
+ +TY N VF+ ET + + KL+D+
Sbjct: 602 ENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 632
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 2 QRERTYRHVSNNVFRSKETKENIVQ*KLVDI 94
+ +TY N VF+ ET + + KL+D+
Sbjct: 420 ENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 450
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 2 QRERTYRHVSNNVFRSKETKENIVQ*KLVDI 94
+ +TY N VF+ ET + + KL+D+
Sbjct: 315 ENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 345
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 260 PDKYENIHTALNIYSVLFSVVFD 192
P K ENI +LNI V+F++ FD
Sbjct: 828 PIKVENITKSLNITVVIFALEFD 850
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -3
Query: 250 TKISTPP*IYTPSYFLWCSILFIYA*MHFYSAQNTTFTSKPMLRKKVVHYIIYIYEFLLN 71
TK PP +Y Y LW F + + +N TF + ++ V ++ F+LN
Sbjct: 77 TKTRLPPNLYAIDYSLWFQPYFPSPGVQYAPEKNFTFDGRASIQ---VEALVASDRFILN 133
>U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 3 protein.
Length = 332
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 206 SVVFDIIYLCINAFLFRTKHNIHF*TNVKEKSCSLY 99
S VF IY C+ ++L K IH V SC ++
Sbjct: 95 SPVFMRIYYCLLSYLIAIKPVIHIFIAVNRMSCVMF 130
>AC024214-16|ABA00187.1| 343|Caenorhabditis elegans Hypothetical
protein Y77E11A.16 protein.
Length = 343
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 226 IYTPSYFLWCSILFIYA*MHFYSAQNTTFTSK 131
I P + ++C ++F Y +H Y N T S+
Sbjct: 204 IVLPMFPIYCMVIFFYKKVHNYLIHNKTTMSE 235
>U40412-4|AAV28342.1| 618|Caenorhabditis elegans Hypothetical
protein F46G11.1 protein.
Length = 618
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 166 FYSAQNTTFTSKPMLRKKVVHYIIYIYEFLLNYIFFSF 53
F T F S M KK++H+++ Y + +FF F
Sbjct: 349 FTQGVRTLFCSFEMPEKKILHWMLVQYAGYDDLVFFLF 386
>Z72514-8|CAA96677.3| 416|Caenorhabditis elegans Hypothetical
protein T10B10.5 protein.
Length = 416
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = -2
Query: 260 PDKYENIHTALNIYSVLFSVVFDIIYLCINAFLFRTKHNIHF 135
PD EN+ + ++ I+ L ++ FL +TK+ +++
Sbjct: 4 PDVLENLEITEQNFLIVLCATVVIVVLFVSFFLVKTKNKLNW 45
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 237 HRLEYILRPIFCGVRYYLFMHKCIFIPHKTQHSLLNQC*GKKLFIILY 94
+R +Y PI G Y L F+ HK Q + +K+FI LY
Sbjct: 261 NRFQYF--PILVGCEYQLQESVSNFVNHKAQCIIPMNVINEKIFIGLY 306
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 237 HRLEYILRPIFCGVRYYLFMHKCIFIPHKTQHSLLNQC*GKKLFIILY 94
+R +Y PI G Y L F+ HK Q + +K+FI LY
Sbjct: 261 NRFQYF--PILVGCEYQLQESVSNFVNHKAQCIIPMNVINEKIFIGLY 306
>Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical
protein T19H5.4 protein.
Length = 313
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 131 FRSECCVLCGIKMHLCI 181
F S C +LC I MHL +
Sbjct: 57 FLSVCLILCAISMHLSL 73
>Z34799-1|CAA84315.1| 147|Caenorhabditis elegans Hypothetical
protein F34D10.3 protein.
Length = 147
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 259 RISTKISTPP*IYTPSYFLWCSILFIYA*MHFYSAQ 152
R++ +S P +Y ++++C I+F+ YS Q
Sbjct: 106 RLTFALSIPYIVYFIPFWIFCGIIFVDLTRRLYSVQ 141
>AF022983-4|AAB69944.1| 387|Caenorhabditis elegans Hypothetical
protein R13D11.4 protein.
Length = 387
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 260 PDKYENIHTALNIYSVLFSVVFDIIYLCINAFLFRT 153
P + +NI+ S F + F ++++C FLF T
Sbjct: 200 PSRLQNINITSVCLSPFFPIFFSLLFVC--PFLFHT 233
>AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 66 protein.
Length = 323
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 223 YTPSYFLWCSILFIYA*MHFYSAQNTTFTSKPM 125
Y P YFL CS LF+ + Y+ TT KPM
Sbjct: 11 YWPIYFLLCSSLFLAMFILIYNF--TTPILKPM 41
>Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical
protein T26H2.5 protein.
Length = 229
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -1
Query: 225 YILRPIFCGVRYYLFMHKCIFIPHKTQHSLLNQC 124
YI R CG Y + + I PH T +C
Sbjct: 113 YIKRTTICGFEYLVINLEPIVEPHHTNSEFYAKC 146
>Z78065-5|CAB01515.1| 954|Caenorhabditis elegans Hypothetical
protein T09E8.2 protein.
Length = 954
Score = 24.6 bits (51), Expect = 9.8
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = -3
Query: 202 WCSILFIYA*MHFYSAQNTTFTSKPMLRKKVVHYIIYIYEFLLNYIFFSFLAAENIIRNV 23
W + LF + + + ++ + LR K Y I +Y F N F + I+ +
Sbjct: 553 WANSLFPVKEGNKFQLKKISWLRRRFLRSKPTRYRICVYHF--NRKAFQVNQDDKIVLDA 610
Query: 22 AIRPLPL 2
PLP+
Sbjct: 611 EALPLPI 617
>AF098504-6|ABO52818.1| 300|Caenorhabditis elegans Serpentine
receptor, class t protein61 protein.
Length = 300
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 239 HTALNIYSVLFSVVFDIIYLCIN 171
+TALN +L S V+ IIY +N
Sbjct: 277 YTALNFMWILNSGVYPIIYFIVN 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,499,430
Number of Sequences: 27780
Number of extensions: 130285
Number of successful extensions: 383
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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