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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B02
         (294 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   0.51 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   1.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   2.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   2.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   4.8  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    20   4.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   6.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   6.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   6.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   6.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   6.3  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    19   8.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    19   8.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      19   8.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      19   8.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    19   8.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    19   8.4  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 0.51
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 37  DGACCELKNEICSAGYCQFIGNFVNKL 117
           +GA C +  + CS   C+  G+ V+++
Sbjct: 99  EGALCNINTDDCSPNPCRNNGSCVDRI 125


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 159 SHESSENFSSKNTSQFIDEIANK 91
           S E S  FSSK +   +DE++ K
Sbjct: 153 SLEKSGLFSSKTSEHSVDELSGK 175


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 64  EICSAGYCQFI 96
           E+C+AGY  FI
Sbjct: 292 EVCNAGYLPFI 302


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -2

Query: 290 GRRTSRVQMSVNLYPPLRHCRTFQ 219
           G  T  ++  +  YPP+ +C+  Q
Sbjct: 31  GLDTEEIKDLLQKYPPIANCKLVQ 54


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 3.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 40  GACCELKNEICSAGYCQFIGNFVNKL 117
           G  CE+  + C  G C   G  ++K+
Sbjct: 254 GYICEINVDDCRPGACHNNGTCLDKV 279



 Score = 19.8 bits (39), Expect = 6.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 64  EICSAGYCQFIGN 102
           ++C+ G C+ IGN
Sbjct: 154 KLCNNGTCEDIGN 166


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 170 PNLIPMNRLRIFPQRT 123
           P L PM+ L  +P RT
Sbjct: 477 PQLSPMSSLPPYPNRT 492


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -1

Query: 171 TQFDSHESSENFSSKNTSQFIDEIANK 91
           T  D+H   E+F  K    FI  +  K
Sbjct: 49  TSGDTHLGGEDFDQKVMDYFIKMVKQK 75


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 49  CELKNEICSAG 81
           C++K+ +CS G
Sbjct: 143 CDVKSSVCSPG 153


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 49  CELKNEICSAG 81
           C++K+ +CS G
Sbjct: 143 CDVKSSVCSPG 153


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 287 RRTSRVQMSVNLYPPLRHCR 228
           R +S V  + + YP L  CR
Sbjct: 43  RISSTVSRNTDTYPTLETCR 62


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 256 TFIRLCVIVELSSSQFELAEFFSGVFTIY 170
           T   LCV+++L  + +    +   V T+Y
Sbjct: 890 TIFALCVVLQLQENDWLQLGYLIFVSTLY 918


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 49  CELKNEICSAG 81
           C++K+ +CS G
Sbjct: 143 CDVKSSVCSPG 153


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 153 HGNQIGYIVNT 185
           HG+ IGY+  T
Sbjct: 423 HGDDIGYLFKT 433


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 153 HGNQIGYIVNT 185
           HG+ IGY+  T
Sbjct: 425 HGDDIGYLFKT 435


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 153 HGNQIGYIVNT 185
           HG+ IGY+  T
Sbjct: 423 HGDDIGYLFKT 433


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 153 HGNQIGYIVNT 185
           HG+ IGY+  T
Sbjct: 425 HGDDIGYLFKT 435


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 158 PMNRLRIFPQRTLHNLLTKL 99
           PMN   +  Q+ +HN  T++
Sbjct: 227 PMNMGHLTQQQIIHNTQTQM 246


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 119 HNLLTKLPI 93
           HNLL KLP+
Sbjct: 352 HNLLGKLPL 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,431
Number of Sequences: 336
Number of extensions: 1388
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5216393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)

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