Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_B02
(294 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 61 2e-10
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 54 2e-08
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 53 5e-08
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 51 2e-07
06_03_1219 - 28491185-28494415 29 0.65
08_02_1620 - 28288152-28288353,28288469-28288557,28288634-282888... 28 1.5
12_01_0423 + 3337401-3337419,3337777-3338235,3338650-3338735,333... 27 2.0
11_04_0443 - 17808897-17809110,17809169-17813652 27 3.5
09_01_0088 + 1268120-1268139,1268288-1268361,1268500-1268750,126... 27 3.5
02_05_0792 - 31777775-31778220,31778506-31778630,31778724-317789... 27 3.5
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319... 27 3.5
12_02_1131 - 26358339-26360609 26 6.1
11_06_0348 - 22561589-22563656,22563788-22564602 26 6.1
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 26 6.1
12_01_0177 - 1312229-1312498,1314758-1315630,1315729-1315885,131... 25 8.0
11_04_0236 + 15215386-15216197,15216854-15218888,15219131-152200... 25 8.0
11_01_0176 - 1403284-1403553,1404313-1404468,1404569-1404787,140... 25 8.0
10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 25 8.0
10_02_0058 - 4695400-4695648,4695846-4696112,4706026-4706430 25 8.0
05_04_0248 - 19363567-19363814,19363900-19364092,19364202-19364846 25 8.0
02_02_0127 - 7038149-7038292,7038380-7038697,7038781-7038879,703... 25 8.0
01_01_0796 + 6190931-6192745 25 8.0
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 60.9 bits (141), Expect = 2e-10
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = +2
Query: 119 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEHARFYAL 292
EVFF+EKF +D WES WV SE E G++ T+GK+ D E DKG+QTSE RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPE-DKGIQTSEDYRFYAI 87
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 54.0 bits (124), Expect = 2e-08
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +2
Query: 119 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEHARFYAL 292
EV FEE+F +D WES WV S+ E G FK TAG++ D + DKG+QT+ AR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDPD-DKGIQTTLDARHFAI 85
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 52.8 bits (121), Expect = 5e-08
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Frame = +2
Query: 44 LAVN*KMKSAVXXXXXXXXXXXXNCEVFFEEKFSDDSWESNWVYSE--HPGKEFGKFKLT 217
+A+ + +AV EVFF+EKF DD WE WV SE G++ T
Sbjct: 1 MAIPRRSAAAVAAVVALASVAAVAGEVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHT 59
Query: 218 AGKFYNDAEADK-----------GLQTSEHARFYAL 292
+GK+Y DA+ DK G+QTSE RFYA+
Sbjct: 60 SGKWYGDAD-DKGMCEVTLLLCAGIQTSEDYRFYAI 94
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 50.8 bits (116), Expect = 2e-07
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +2
Query: 119 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEHARFYAL 292
EV FEE+F DD W S WV S+ E G FK TAG + D + D+G+QT+ A+ +A+
Sbjct: 28 EVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDPD-DRGIQTTSDAKHFAI 85
>06_03_1219 - 28491185-28494415
Length = 1076
Score = 29.1 bits (62), Expect = 0.65
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 186 GCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIAST 73
G SL+ S ++N SSK+T F+ E+A + A A T
Sbjct: 741 GASLFDSMSSELYNDNDSSKDTIFFMSEVAGEAAKAVT 778
>08_02_1620 - 28288152-28288353,28288469-28288557,28288634-28288828,
28289082-28289423,28290227-28291672,28292590-28292666,
28293160-28294509,28295921-28296029,28296896-28297007,
28297800-28297957
Length = 1359
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -1
Query: 279 LACSDVCKPLSASASL*NFPAVNLNLPNSFPGCS--LYTQF-DSHESSENFSSKNTSQF 112
+A S K + ASA + + + +P S+P CS L +F D +S++ S+K S+F
Sbjct: 1248 VAVSPSLKSMFASAQMSPILPLRVLVPASYPKCSPVLLDKFPDEQRNSDDLSTKARSKF 1306
>12_01_0423 +
3337401-3337419,3337777-3338235,3338650-3338735,
3338974-3339022,3339225-3339533,3339555-3339710,
3339871-3340086,3340404-3340906,3341050-3341116,
3341215-3341272,3341561-3341699,3341840-3341956,
3342069-3342246,3342459-3343093
Length = 996
Score = 27.5 bits (58), Expect = 2.0
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -1
Query: 207 NLPNSFPGCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIASTADFIF*FTASTVFIK 28
N PN+FP S F + S F S S + I++ A AS++ F T S F
Sbjct: 457 NPPNAFPSASANNPFAPKQPSTGFGS--ISSVFNSISSNTAPASSSPFA--PTISNPFPT 512
Query: 27 EPSC 16
+ +C
Sbjct: 513 QTNC 516
>11_04_0443 - 17808897-17809110,17809169-17813652
Length = 1565
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 228 NFPAVNLNLPNSFPGCSLYTQFDSHESSENFSSKNTS---QFIDEIANK 91
NF VNL +PN YT E +N+ + S F+D+I K
Sbjct: 1086 NFVIVNLKIPNDQSAVPAYTVLSLLECIQNWIACQVSLPKDFLDKICKK 1134
>09_01_0088 +
1268120-1268139,1268288-1268361,1268500-1268750,
1268845-1269048,1269488-1269805,1269893-1269910
Length = 294
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 131 EEKFSDDSWESNWVYSEHPGK-EFGKFKLTAGKFYNDAEADKGLQT 265
E KF+ D +NW+ + GK K KL G + + ++ LQT
Sbjct: 115 ERKFAIDGRANNWILHQLDGKLRQYKSKLKKGYYKPNLPMERALQT 160
>02_05_0792 -
31777775-31778220,31778506-31778630,31778724-31778911,
31779716-31779892
Length = 311
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2
Query: 269 QMSVNLYPPLRHCRTFQQSI*TCRILFRGVHYIPNLIPMN---RLRIFPQRTLHNL 111
++ +L+P +RH + SI I G+H P L +N R+R RT+ +L
Sbjct: 100 EILASLFPSIRHFAFEESSIRPSIISRYGIHGFPTLFLLNSTMRVRYHGPRTVKSL 155
>01_05_0679 +
24230740-24230929,24231330-24231461,24231710-24231977,
24232170-24232388,24233538-24233673,24233899-24234147,
24234783-24235100
Length = 503
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 194 EFGKFKLTAGKFYNDAEAD-KGLQTSEHARF 283
EF KFK G F +D D KGL + HA +
Sbjct: 109 EFNKFKCEDGSFKSDINNDPKGLLSLYHAAY 139
>12_02_1131 - 26358339-26360609
Length = 756
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 170 PNLIPMNRLRIFPQRTLHNLLTK 102
P+L+ MN+L ++ Q LH + TK
Sbjct: 206 PDLVHMNKLAVYAQGHLHWITTK 228
>11_06_0348 - 22561589-22563656,22563788-22564602
Length = 960
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 185 PGKEFGKFKLTAGKFYNDAEADKGLQ 262
P K +FK+TAGKF N + +GL+
Sbjct: 737 PPKFLDEFKVTAGKFANVPQWIEGLE 762
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 149 DSWESNWVYSEHPGKEFGKFK 211
D W+S+W Y+ P K F+
Sbjct: 157 DDWKSDWFYTPSPTKRASDFR 177
>12_01_0177 -
1312229-1312498,1314758-1315630,1315729-1315885,
1316207-1316247
Length = 446
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 161 IPMNRLRIFPQRTLHNLLTKLP 96
I + +R+F ++TL N+LT +P
Sbjct: 318 IKASTIRLFDEKTLQNILTGIP 339
>11_04_0236 + 15215386-15216197,15216854-15218888,15219131-15220017,
15222420-15226194
Length = 2502
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 176 SEHPGKEFGKFKLTAGKFYNDAEADKGLQT 265
S HPG F+L G FY D + + T
Sbjct: 1871 SNHPGNPRINFQLVDGVFYGDEDEEHATPT 1900
>11_01_0176 -
1403284-1403553,1404313-1404468,1404569-1404787,
1405198-1405440,1405539-1405695,1406186-1406226
Length = 361
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 161 IPMNRLRIFPQRTLHNLLTKLP 96
I + +R+F ++TL N+LT +P
Sbjct: 181 IKASTIRLFDEKTLQNILTGIP 202
>10_08_1002 +
22160109-22160264,22160374-22160484,22160612-22160689,
22160774-22160921,22161007-22161077,22161430-22161526,
22161603-22161790,22161960-22162223
Length = 370
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/50 (22%), Positives = 21/50 (42%)
Frame = -1
Query: 213 NLNLPNSFPGCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIASTADF 64
N+N P S SH + ++S +T F+ + ++ S + F
Sbjct: 252 NMNQAGDMPSFSHAMSSSSHHNKRQYASDHTQDFVVKAVRQVLFDSISSF 301
>10_02_0058 - 4695400-4695648,4695846-4696112,4706026-4706430
Length = 306
Score = 25.4 bits (53), Expect = 8.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 143 RIFPQRTLHNLLTKLPINW 87
R+FP+RT+H + + ++W
Sbjct: 114 RLFPERTMHLVCSSFSLHW 132
>05_04_0248 - 19363567-19363814,19363900-19364092,19364202-19364846
Length = 361
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -1
Query: 225 FPAVNLNLPNSFPGCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIASTA 70
+PA + PN P ++ T+F H+++E +++Q + A A TA
Sbjct: 10 YPAPESHPPNHNPTHAIATKFPIHKTAETLVITSSAQLSSLLLPGEAAAGTA 61
>02_02_0127 -
7038149-7038292,7038380-7038697,7038781-7038879,
7038958-7039050,7039138-7039341,7039435-7039525,
7039593-7039695,7039761-7039907,7040825-7040876,
7041003-7041138,7041846-7041911,7041981-7042045
Length = 505
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 131 EEKFSDDSWESNWVYSEHPGK-EFGKFKLTAGKFYNDAEADKGLQT 265
E KF+ D +NW+ + GK K KL G + + ++ LQT
Sbjct: 220 ERKFAIDGRANNWILHQLDGKWRQYKSKLKKGYYKPNLPMERVLQT 265
>01_01_0796 + 6190931-6192745
Length = 604
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 107 TKLPINWQ*PALQISFFNSQQAPSLSKNP 21
T LP+ Q P +Q F S QAP L+ P
Sbjct: 374 THLPLQVQAPFMQEPFLFSDQAPVLAPPP 402
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,890,037
Number of Sequences: 37544
Number of extensions: 141530
Number of successful extensions: 432
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 328462236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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