Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B02
         (294 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.   101   7e-24
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   0.78 
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   2.4  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        22   4.1  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        22   4.1  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     21   7.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           21   9.6  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    21   9.6  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       21   9.6  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       21   9.6  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       21   9.6  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score =  101 bits (241), Expect = 7e-24
 Identities = 44/60 (73%), Positives = 49/60 (81%)
 Frame = +2

Query: 113 NCEVFFEEKFSDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAEADKGLQTSEHARFYAL 292
           N +V+FEE F DDSW+  WV SEH G E+GKF  TAGKFYNDAEADKGLQTS+ ARFYAL
Sbjct: 15  NAKVYFEEGFKDDSWQKTWVQSEHKGVEYGKFVHTAGKFYNDAEADKGLQTSQDARFYAL 74


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 238  VIVELSSSQFELAEFFSGVFTI 173
            +I+ L S+ FEL+++  G++ +
Sbjct: 1243 IIISLRSNMFELSDYLVGIYKV 1264


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 203 CRILFRGVHYIPNLIPMNRL 144
           C    R +  +PNLIP NRL
Sbjct: 447 CAKADRKLFEVPNLIPWNRL 466


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 189 PGCSLYTQFDSHESSENFSS 130
           PG  LY Q DS +   ++SS
Sbjct: 17  PGRVLYAQKDSEDGGSHYSS 36


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 189 PGCSLYTQFDSHESSENFSS 130
           PG  LY Q DS +   ++SS
Sbjct: 17  PGRVLYAQKDSEDGGSHYSS 36


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 31  DKDGACCELKNEICSAGYCQFIG 99
           D+DG     K  + + G+CQ  G
Sbjct: 759 DEDGHFVRYKARLVAQGFCQKFG 781


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 68  ISFFNSQQAPSLSKNPRAEFLQ 3
           I+F +    PSLS+   AEF++
Sbjct: 142 ITFLSCYAPPSLSREGFAEFVE 163


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 117 QFIDEIANKLAIASTADFI 61
           +F+D  +NK+ ++  A FI
Sbjct: 279 RFVDPTSNKITLSRDAKFI 297


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 117 QFIDEIANKLAIASTADFI 61
           +F+D  +NK+ ++  A FI
Sbjct: 49  RFVDPTSNKITLSRDAKFI 67


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 117 QFIDEIANKLAIASTADFI 61
           +F+D  +NK+ ++  A FI
Sbjct: 49  RFVDPTSNKITLSRDAKFI 67


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 117 QFIDEIANKLAIASTADFI 61
           +F+D  +NK+ ++  A FI
Sbjct: 49  RFVDPTSNKITLSRDAKFI 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,528
Number of Sequences: 2352
Number of extensions: 5144
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18253998
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)