Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_B02
         (294 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   4.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   7.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    19   9.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   9.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    19   9.6  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 156 HESSENFSSKNTSQFIDE 103
           HE   N+ SKN +Q + E
Sbjct: 184 HEKLRNWFSKNVNQTVAE 201


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 171 TQFDSHESSENFSSKNTSQFIDEIANKL 88
           T   SH+      + ++S+F +++ NKL
Sbjct: 53  TLISSHDELPGHINCDSSKFEEDLMNKL 80


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 170 PNLIPMNRLRIFPQRTLHN 114
           P + PM   R+FP   + N
Sbjct: 204 PKVSPMTFCRVFPFHLMFN 222


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 58  KNEICSAGYCQFIGNFVNK 114
           +N+ C+AG      NF NK
Sbjct: 91  ENKNCNAGSLTVKKNFANK 109


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 170 PNLIPMNRLRIFPQRTLHN 114
           P + PM   R+FP   + N
Sbjct: 204 PKVSPMTFCRVFPFHLMFN 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,324
Number of Sequences: 438
Number of extensions: 1371
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5994288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)