Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_B01
(353 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0703 - 19614057-19614264,19615305-19615407,19615880-196159... 58 3e-09
06_02_0148 - 12280794-12280962,12281102-12281210,12281283-122813... 57 3e-09
10_05_0036 + 8443957-8444112,8446063-8446129,8446685-8446743,844... 54 2e-08
11_01_0536 + 4243306-4243449,4243790-4243856,4243996-4244054,424... 52 1e-07
03_05_0833 - 28045442-28045881,28045961-28046063,28046172-280462... 52 1e-07
05_04_0038 + 17403620-17403769,17403975-17404038,17404807-174048... 51 2e-07
09_04_0586 - 18736643-18736914,18737085-18737187,18737279-187379... 50 4e-07
05_04_0036 + 17386160-17386318,17386588-17386651,17387089-173871... 50 4e-07
05_04_0043 + 17450999-17451181,17451353-17451416,17451642-174517... 50 5e-07
04_04_0496 + 25631832-25631972,25632094-25632160,25634993-256350... 50 5e-07
08_02_1201 - 25243516-25243681,25243784-25243892,25244046-252441... 50 7e-07
03_05_0832 - 28037047-28037315,28037428-28037530,28037664-280376... 49 9e-07
01_06_1668 + 38998348-38998434,38999234-38999300,38999377-389994... 48 2e-06
07_03_1537 + 27562097-27562340,27562436-27562494,27562605-275626... 48 3e-06
01_06_1111 - 34599014-34599215,34599378-34599497,34599654-345997... 47 4e-06
01_05_0061 + 17752382-17752652,17753521-17753579,17753919-17753936 47 4e-06
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353... 46 6e-06
01_06_1110 - 34582267-34582468,34582732-34582819,34589337-345894... 46 6e-06
05_04_0039 + 17421826-17421966,17422105-17422168,17422562-174226... 45 1e-05
08_02_1202 - 25253175-25253340,25255573-25255681,25256021-252561... 44 5e-05
12_02_0067 + 13144002-13144203,13144471-13144529,13144638-131447... 38 0.002
03_02_0139 - 5844107-5844278,5844413-5844521,5844630-5844732,584... 34 0.037
06_03_1162 + 28093749-28093851,28093939-28093997,28094691-280947... 30 0.45
04_04_0220 - 23708174-23708316,23708569-23708851 29 0.79
01_06_1196 + 35322662-35324212 27 4.2
04_01_0139 + 1560962-1561094,1561205-1561416,1561481-1561706,156... 27 5.6
04_04_1539 + 34243234-34243413,34243783-34243850,34244159-342442... 26 7.4
12_02_0061 - 13063434-13063525,13063679-13064566,13064912-130649... 26 9.8
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 26 9.8
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 26 9.8
04_04_0217 - 23693124-23693535,23693965-23694052,23694428-236945... 26 9.8
02_05_0430 - 28923784-28923830,28923931-28924341,28924552-289249... 26 9.8
02_03_0053 - 14475106-14475126,14475171-14475512,14475969-144760... 26 9.8
>09_04_0703 -
19614057-19614264,19615305-19615407,19615880-19615973,
19616216-19616229,19616384-19616595,19617653-19617940,
19618275-19618362,19618444-19618515,19618597-19618672,
19618755-19618813,19618953-19619016,19619253-19619402
Length = 475
Score = 57.6 bits (133), Expect = 3e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2
Query: 203 YEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
++FP+ F+FG ++A Q+EGA DGR PSIWD I N ++ DGSNAD
Sbjct: 34 HDFPEGFVFGAGSSAFQVEGAAAEDGRKPSIWDTFI--NQGYMPDGSNAD 81
>06_02_0148 -
12280794-12280962,12281102-12281210,12281283-12281385,
12281587-12281618,12281709-12281926,12282035-12282150,
12282428-12282683,12282912-12282999,12283393-12283468,
12283562-12283620,12285236-12285305,12285399-12285539
Length = 478
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2
Query: 206 EFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
+FP++F FG +++A Q EGA GR PSIWD H +P+ + +GSN D
Sbjct: 32 QFPEDFFFGTASSAYQYEGAVREGGRGPSIWDTFTHNHPEKIANGSNGD 80
>10_05_0036 +
8443957-8444112,8446063-8446129,8446685-8446743,
8446855-8446930,8447118-8447189,8447326-8447413,
8447489-8447744,8447934-8448049,8448247-8448470,
8448685-8448716,8448882-8449018,8449200-8449289,
8449383-8449557
Length = 515
Score = 54.4 bits (125), Expect = 2e-08
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +2
Query: 188 GSKSSYEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
G + FP+ F+FG +++A Q EGA DGR P+IWD HT K + D SNAD
Sbjct: 31 GGLTRKSFPNGFVFGTASSAYQYEGAVKEDGRGPTIWDKFAHTFGKII-DFSNAD 84
>11_01_0536 +
4243306-4243449,4243790-4243856,4243996-4244054,
4244157-4244314,4244742-4244990,4245079-4245451,
4245580-4245702
Length = 390
Score = 52.0 bits (119), Expect = 1e-07
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +2
Query: 176 NLAGGSKSSYEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKD 337
N+A S Y FP +F+FG +AA Q EGA+ G+ PSIWD H K + +
Sbjct: 23 NVAYAKFSRYSFPKDFIFGTGSAAYQYEGAYKEGGKGPSIWDTFTHIPGKILNN 76
>03_05_0833 -
28045442-28045881,28045961-28046063,28046172-28046203,
28046299-28046516,28046606-28046721,28047757-28048000,
28048423-28048510,28048596-28048667,28048758-28048869,
28049047-28049115,28049627-28049685,28050067-28050325
Length = 603
Score = 52.0 bits (119), Expect = 1e-07
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +2
Query: 188 GSKSSYEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
G S FP F+FG +T+A Q+EG GR PSIWD +HT P + NAD
Sbjct: 43 GGLSRAAFPKGFVFGTATSAFQVEGMAASGGRGPSIWDPFVHT-PGNIAGNGNAD 96
>05_04_0038 +
17403620-17403769,17403975-17404038,17404807-17404865,
17404981-17405056,17405196-17405267,17405411-17405498,
17405617-17405872,17405972-17406087,17406757-17406977,
17407074-17407102,17407192-17407291,17407405-17407492,
17407640-17407874
Length = 517
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +2
Query: 206 EFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGS 343
+FPD F FG TAA Q EGA DGR+PSIWD H+ + +DG+
Sbjct: 35 DFPDGFAFGAGTAAYQYEGAAAEDGRTPSIWDTYTHSG-RHPEDGT 79
>09_04_0586 -
18736643-18736914,18737085-18737187,18737279-18737900,
18738376-18738463,18738537-18738614,18738741-18738816,
18738912-18738970,18739061-18739127,18739268-18739405
Length = 500
Score = 50.4 bits (115), Expect = 4e-07
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +2
Query: 203 YEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
Y FP +F+FG +AA Q EGA+ G+ PS+WD+ H P + + N D
Sbjct: 30 YSFPKDFIFGTGSAAYQYEGAYKEGGKGPSVWDNFTHI-PGKILNNDNGD 78
>05_04_0036 +
17386160-17386318,17386588-17386651,17387089-17387147,
17387268-17387343,17387521-17387592,17387786-17387873,
17387992-17388250,17388446-17388561,17388876-17389096,
17389196-17389224,17389285-17389420,17389567-17389651,
17389735-17389963
Length = 530
Score = 50.4 bits (115), Expect = 4e-07
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = +2
Query: 206 EFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHT 316
+FPD F FG TAA Q EGA DGR+PSIWD H+
Sbjct: 38 DFPDGFTFGAGTAAFQYEGAAAEDGRTPSIWDTYAHS 74
>05_04_0043 +
17450999-17451181,17451353-17451416,17451642-17451700,
17452331-17452406,17452469-17452597,17453524-17453611,
17453711-17453966,17454308-17454423,17454569-17454789,
17454977-17455005,17455167-17455273,17455778-17456015
Length = 521
Score = 50.0 bits (114), Expect = 5e-07
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 206 EFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIH 313
+FP F+FG T+A Q EGA + DGRSPSIWD H
Sbjct: 46 DFPGEFVFGAGTSAYQYEGATDEDGRSPSIWDTFTH 81
>04_04_0496 +
25631832-25631972,25632094-25632160,25634993-25635054,
25636173-25636248,25636355-25636429,25637768-25637825,
25637955-25638207,25639030-25639037,25639159-25639411,
25639503-25639605,25639750-25639852,25639947-25640160
Length = 470
Score = 50.0 bits (114), Expect = 5e-07
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +2
Query: 206 EFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
+FP FLFG +T+A QIEGA+ D + + WD HT + DG N D
Sbjct: 32 DFPPGFLFGAATSAYQIEGAYLDDNKGLNNWDVFTHTQAGRISDGRNGD 80
>08_02_1201 -
25243516-25243681,25243784-25243892,25244046-25244148,
25244273-25244304,25244405-25244625,25244948-25245063,
25245149-25245404,25245916-25246003,25246133-25246210,
25246541-25246659,25246893-25246942,25247117-25247245
Length = 488
Score = 49.6 bits (113), Expect = 7e-07
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +2
Query: 188 GSKSSYEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVK 334
G+ + + FP++F+FG +AA Q EGA N GR PSIWD P K
Sbjct: 22 GAFNRFSFPEDFIFGTGSAAYQYEGAVNEGGRGPSIWDTAFKVLPFLTK 70
>03_05_0832 -
28037047-28037315,28037428-28037530,28037664-28037695,
28037788-28038005,28038145-28038260,28038514-28038757,
28039129-28039216,28039513-28039588,28040126-28040164,
28040347-28040405,28041292-28041529
Length = 493
Score = 49.2 bits (112), Expect = 9e-07
Identities = 25/55 (45%), Positives = 29/55 (52%)
Frame = +2
Query: 188 GSKSSYEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
G S FP F+FG +T+A Q+EG GR PSIWD HT P V N D
Sbjct: 36 GGLSRAAFPKRFVFGTATSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGD 89
>01_06_1668 +
38998348-38998434,38999234-38999300,38999377-38999435,
38999636-38999711,38999856-38999930,39000007-39000094,
39000261-39000486,39000689-39000804,39001172-39001383,
39001882-39001916,39002005-39002107,39002645-39002753,
39002838-39003036
Length = 483
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +2
Query: 206 EFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
+FPD F+FGV+T+A QIEGA G+ +IWD + N + + DGS+ +
Sbjct: 14 DFPDGFVFGVATSAYQIEGARREGGKGDNIWD-VFTENKERILDGSSGE 61
>07_03_1537 +
27562097-27562340,27562436-27562494,27562605-27562680,
27562776-27562847,27562934-27563021,27563118-27563361,
27563490-27563605,27563783-27564000,27564113-27564144,
27564262-27564364,27564471-27564751
Length = 510
Score = 47.6 bits (108), Expect = 3e-06
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +2
Query: 161 NAEIINLAGGSKSSYEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDG 340
N EI + G S+ + FP+ F+FG + +A Q+EG GR PSIWD I P + +
Sbjct: 31 NPEIYDAGGLSRRA--FPEGFVFGTAASAYQVEGMAKQGGRGPSIWDAFIE-KPGTIPNN 87
Query: 341 SNAD 352
+ AD
Sbjct: 88 ATAD 91
>01_06_1111 -
34599014-34599215,34599378-34599497,34599654-34599760,
34600452-34600480,34600768-34600982,34601215-34601330,
34601960-34602218,34602342-34602429,34602932-34603003,
34603080-34603155,34603579-34603637,34603937-34604000,
34604104-34604232
Length = 511
Score = 47.2 bits (107), Expect = 4e-06
Identities = 24/55 (43%), Positives = 31/55 (56%)
Frame = +2
Query: 188 GSKSSYEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
G + +FP +F+FG +T+A Q EGA DGR SIWD H +KD S D
Sbjct: 22 GGYTRNDFPADFVFGAATSAYQYEGAAAEDGRGASIWDTFTHAGK--MKDKSTGD 74
>01_05_0061 + 17752382-17752652,17753521-17753579,17753919-17753936
Length = 115
Score = 47.2 bits (107), Expect = 4e-06
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 188 GSKSSYEFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
G S FP F+FG + +A Q+EG DGR PSIWD + T P + + + AD
Sbjct: 47 GGLSRRSFPAGFVFGTAASAYQVEGMALKDGRGPSIWDAFVKT-PGEIANNATAD 100
>01_07_0064 +
40834649-40834786,40834934-40834997,40835333-40835391,
40835602-40835677,40835775-40835846,40837641-40837728,
40838239-40838497,40838766-40839000,40839447-40839470,
40839910-40839997,40840110-40840300,40841082-40841322,
40841803-40842556
Length = 762
Score = 46.4 bits (105), Expect = 6e-06
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +2
Query: 206 EFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIH 313
+FP++F+FG +T++ Q EG ++ DGRSPS WD H
Sbjct: 31 DFPEDFVFGSATSSYQYEGGFDEDGRSPSNWDIFTH 66
>01_06_1110 -
34582267-34582468,34582732-34582819,34589337-34589439,
34589886-34589914,34590114-34590144,34590621-34590822,
34591424-34591539,34591784-34592006,34592151-34592238,
34592336-34592407,34592485-34592560,34593822-34593880,
34595341-34595404,34595487-34595618
Length = 494
Score = 46.4 bits (105), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 206 EFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIH 313
+FP +F+FG +T+A Q +GA DGRSP+IWD H
Sbjct: 29 DFPRDFVFGAATSAYQYDGAAAEDGRSPTIWDTFAH 64
>05_04_0039 +
17421826-17421966,17422105-17422168,17422562-17422620,
17423410-17423536,17425029-17425116,17425196-17425451,
17425565-17425680,17426232-17426328,17426636-17426771,
17426892-17426979,17427133-17427367
Length = 468
Score = 45.2 bits (102), Expect = 1e-05
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 206 EFPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHT 316
+FP +F FG T+A Q EG DGR+PSIWD H+
Sbjct: 32 DFPHDFAFGAGTSAYQYEGGAAEDGRTPSIWDTYTHS 68
>08_02_1202 -
25253175-25253340,25255573-25255681,25256021-25256123,
25256246-25256277,25257697-25258178,25258946-25259025,
25259107-25259165,25259341-25259413,25259526-25259660
Length = 412
Score = 43.6 bits (98), Expect = 5e-05
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 176 NLAGGSKSSYEFPDNFLFGVSTAA----AQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGS 343
N G+ + + FP+ FLFG T+A Q EGA +D R +IWD P + DGS
Sbjct: 20 NRVHGALNRHSFPEGFLFGTGTSAYQYDVQYEGA--VDKRGQNIWDTFSRI-PGKIADGS 76
Query: 344 NAD 352
NAD
Sbjct: 77 NAD 79
>12_02_0067 +
13144002-13144203,13144471-13144529,13144638-13144713,
13144802-13144873,13144969-13145056,13145365-13145601,
13145705-13145910,13145946-13146122,13146220-13146251,
13146330-13146432,13146547-13146815,13148029-13148175,
13148272-13148412,13148509-13148595,13148841-13148931,
13149093-13149192,13149292-13149352,13149442-13149663,
13149756-13149872,13149972-13150061,13150168-13150344
Length = 917
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 209 FPDNFLFGVSTAAAQIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
FP F+FG +++A Q+EG GR P IWD + P D S A+
Sbjct: 31 FPAGFVFGTASSAYQVEGNALQYGRGPCIWDTFL-MQPGVTPDNSTAN 77
>03_02_0139 -
5844107-5844278,5844413-5844521,5844630-5844732,
5844834-5844865,5845211-5845434,5845774-5845889,
5845997-5846252,5846720-5846807,5846891-5846962,
5847096-5847171,5847302-5847360,5848202-5848268,
5848760-5848825,5850466-5850657
Length = 543
Score = 33.9 bits (74), Expect = 0.037
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 22/100 (22%)
Frame = +2
Query: 119 IMLHKYGTLN*SFKNAEIINLAGGSKSSYEFPDNFLFGVSTAAAQ--------------- 253
+++ +G + S + I +GG + FP+ F+FG ++AA Q
Sbjct: 21 VLVVVFGVASSSLRGC-IAQQSGGGLTRGSFPEGFVFGTASAAYQRCSVAPDELPIHTAK 79
Query: 254 -------IEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
EGA DGR +IWD HT K + D SNAD
Sbjct: 80 AVIEVFEYEGAVKEDGRGQTIWDTFAHTFGK-ITDFSNAD 118
>06_03_1162 +
28093749-28093851,28093939-28093997,28094691-28094766,
28094848-28094919,28095023-28095110,28095230-28095485,
28095583-28095698,28096064-28096127,28096252-28096354,
28096446-28096554,28097048-28097234
Length = 410
Score = 30.3 bits (65), Expect = 0.45
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +2
Query: 251 QIEGAWNIDGRSPSIWDHLIHTNPKFVKDGSNAD 352
Q EGA N R P+IWD L P V D SNAD
Sbjct: 12 QYEGAVNEGQRGPTIWDTLT-KRPGRVIDFSNAD 44
>04_04_0220 - 23708174-23708316,23708569-23708851
Length = 141
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 251 QIEGAWNIDGRSPSIWDHLIHTNP 322
Q EGA GR PSIWD H P
Sbjct: 109 QFEGAAAKGGRGPSIWDTFTHQYP 132
>01_06_1196 + 35322662-35324212
Length = 516
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 191 SKSSYEFPDNFLFGVSTAAAQIEGAWNI 274
S+S EF DNF F + A + GA+ +
Sbjct: 226 SRSRSEFADNFFFVLGVVAPVVAGAYTV 253
>04_01_0139 +
1560962-1561094,1561205-1561416,1561481-1561706,
1561782-1562029,1562374-1562392,1562747-1562886,
1563134-1563361
Length = 401
Score = 26.6 bits (56), Expect = 5.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 259 RSVEHRWKITQYMGPFNTYKSEICQRWI 342
RS++ RWKI PF Y +++ W+
Sbjct: 248 RSLKRRWKILDDASPFFPYPTQVDIVWL 275
>04_04_1539 +
34243234-34243413,34243783-34243850,34244159-34244274,
34244400-34244514,34244601-34244799
Length = 225
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 311 VLNGPIYWVIFHLCSTLLRFEQQP 240
+L GP+Y+VI L S L+ + Q P
Sbjct: 85 LLRGPLYYVIVLLVSVLVFWRQSP 108
>12_02_0061 -
13063434-13063525,13063679-13064566,13064912-13064960,
13065059-13065330,13065422-13065797
Length = 558
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 263 LLRFEQQPWKLQIRSCLEIHNWTLNLRPNLLFRH 162
L R W+++IR + + W + P LL R+
Sbjct: 308 LYRRRDDGWRVKIRGAVLDNRWVVPYNPGLLMRY 341
>09_06_0076 +
20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 25.8 bits (54), Expect = 9.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -1
Query: 284 IFHLCSTLLRFEQQPWKLQIRSCLEIHNWTLNLRPNLLFRHF*MIS*VYHIY 129
I+HL S + R ++ K LEIH + L PN+LF ++ VY Y
Sbjct: 233 IYHLLS-IYRHNKERKKWYSTLSLEIHVFILFYVPNILFAASELVLIVYKQY 283
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Frame = +2
Query: 266 WNIDGRSPSIWDHL----IHTNPK 325
WN+DG IW++L I+T PK
Sbjct: 287 WNLDGLLEMIWEYLDLVRIYTKPK 310
>04_04_0217 -
23693124-23693535,23693965-23694052,23694428-23694503,
23694729-23694787,23694853-23694934,23695533-23696577,
23696700-23696998
Length = 686
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = +2
Query: 257 EGAWNIDGRSPSIWDHLIHTNPKF----VKDGSNAD 352
EG GR PSIWD + +P + D SN D
Sbjct: 450 EGGAAEGGRGPSIWDTFTYQHPGMFNYKIADKSNGD 485
>02_05_0430 -
28923784-28923830,28923931-28924341,28924552-28924963,
28925000-28925542,28925790-28925884,28926003-28927033,
28927304-28927452,28927483-28927523,28927594-28928206
Length = 1113
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 263 LLRFEQQPWKLQIRSCLEIHNWTLNLRPNLLFRH 162
L R W+++IR + + W + P LL R+
Sbjct: 838 LYRRRDDGWRVKIRGAVLDNRWVVPYNPGLLMRY 871
>02_03_0053 -
14475106-14475126,14475171-14475512,14475969-14476099,
14476198-14477230,14477495-14477702,14477761-14477807,
14477906-14477971,14478644-14478804,14478985-14479118,
14479244-14479452
Length = 783
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 263 LLRFEQQPWKLQIRSCLEIHNWTLNLRPNLLFRH 162
L R W+++IR + + W + P LL R+
Sbjct: 289 LYRRRDDGWRVKIRGAVLDNRWVVPYNPGLLMRY 322
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,471,054
Number of Sequences: 37544
Number of extensions: 202493
Number of successful extensions: 452
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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