Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_A20
         (461 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.52 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.6  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   3.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.9  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    21   8.5  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    21   8.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.5  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 123 IVRTPGGRLVYQYVKKPKKI 182
           + +  G RLVYQ+V  PK I
Sbjct: 527 LAKVDGQRLVYQFVDVPKDI 546


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 451 VFIICYLKPYIYLAAFLPD 395
           V ++C   P IY+  F PD
Sbjct: 750 VTLVCLYSPKIYIILFQPD 768


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 451 VFIICYLKPYIYLAAFLPD 395
           V ++C   P IY+  F PD
Sbjct: 840 VTLVCLYSPKIYIILFQPD 858


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 120 SFGLTLCCKTNVV 82
           +F  T+CCKT ++
Sbjct: 338 AFKQTICCKTRII 350


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 276  SLSSCGSRDENALRAS 229
            S+S  GSRDE++ R S
Sbjct: 1402 SISRAGSRDEDSTRDS 1417


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 312 VKQRIVRAFLIEEQKIVKV 368
           + + I+R FLI +QK  K+
Sbjct: 73  ITRYIIRMFLISQQKTSKL 91


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 312 VKQRIVRAFLIEEQKIVKV 368
           + + I+R FLI +QK  K+
Sbjct: 56  ITRYIIRMFLISQQKTSKL 74


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 136 GVRTILLWFDFVL*DKRRLNVSRCTIL*HR 47
           G+R   +W D +    R LN + C  L  R
Sbjct: 28  GLRWFEIWRDSLPTKMRELNATACAALYER 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,938
Number of Sequences: 438
Number of extensions: 2356
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)