Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_A14
         (448 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070896-1|AAL48518.1|  160|Drosophila melanogaster LP04958p pro...   213   9e-56
AE014298-2882|AAN09507.1|  160|Drosophila melanogaster CG14206-P...   213   9e-56
AE014298-2881|AAF48978.2|  160|Drosophila melanogaster CG14206-P...   213   9e-56
AE014297-4155|AAF56731.1|  163|Drosophila melanogaster CG12275-P...   183   8e-47
AF145693-1|AAD38668.2|  162|Drosophila melanogaster LD32148p pro...   181   3e-46
AY118800-1|AAM50660.1|  255|Drosophila melanogaster GH19623p pro...    32   0.40 
AE013599-635|AAF59104.2|  255|Drosophila melanogaster CG30362-PA...    32   0.40 
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot...    29   3.8  
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot...    29   3.8  
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot...    29   3.8  
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot...    29   3.8  
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot...    29   3.8  
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot...    29   3.8  
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot...    29   3.8  
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot...    29   3.8  
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro...    29   3.8  
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA...    29   3.8  
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran...    29   3.8  

>AY070896-1|AAL48518.1|  160|Drosophila melanogaster LP04958p
           protein.
          Length = 160

 Score =  213 bits (520), Expect = 9e-56
 Identities = 105/142 (73%), Positives = 117/142 (82%), Gaps = 4/142 (2%)
 Frame = +1

Query: 34  MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 213
           M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1   MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60

Query: 214 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 381
           AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR  R+ETVR R AVG P  P   ++T 
Sbjct: 61  AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120

Query: 382 EDRSAYRRAPTAGAPHDKKADV 447
           EDRSAYRRAP  G+  DKK DV
Sbjct: 121 EDRSAYRRAP-GGSGVDKKGDV 141


>AE014298-2882|AAN09507.1|  160|Drosophila melanogaster CG14206-PC,
           isoform C protein.
          Length = 160

 Score =  213 bits (520), Expect = 9e-56
 Identities = 105/142 (73%), Positives = 117/142 (82%), Gaps = 4/142 (2%)
 Frame = +1

Query: 34  MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 213
           M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1   MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60

Query: 214 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 381
           AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR  R+ETVR R AVG P  P   ++T 
Sbjct: 61  AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120

Query: 382 EDRSAYRRAPTAGAPHDKKADV 447
           EDRSAYRRAP  G+  DKK DV
Sbjct: 121 EDRSAYRRAP-GGSGVDKKGDV 141


>AE014298-2881|AAF48978.2|  160|Drosophila melanogaster CG14206-PB,
           isoform B protein.
          Length = 160

 Score =  213 bits (520), Expect = 9e-56
 Identities = 105/142 (73%), Positives = 117/142 (82%), Gaps = 4/142 (2%)
 Frame = +1

Query: 34  MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 213
           M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1   MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60

Query: 214 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 381
           AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR  R+ETVR R AVG P  P   ++T 
Sbjct: 61  AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120

Query: 382 EDRSAYRRAPTAGAPHDKKADV 447
           EDRSAYRRAP  G+  DKK DV
Sbjct: 121 EDRSAYRRAP-GGSGVDKKGDV 141


>AE014297-4155|AAF56731.1|  163|Drosophila melanogaster CG12275-PA
           protein.
          Length = 163

 Score =  183 bits (446), Expect = 8e-47
 Identities = 93/143 (65%), Positives = 107/143 (74%), Gaps = 5/143 (3%)
 Frame = +1

Query: 34  MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 213
           M +PK NRV+IYEYLFKEGV+VAKKD    KH +L+KIPNLQVIK MQSL SRG+VKEQF
Sbjct: 1   MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60

Query: 214 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPART 378
           AWRHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+  VR RG  G P       ++T
Sbjct: 61  AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKT 120

Query: 379 AEDRSAYRRAPTAGAPHDKKADV 447
            +DRS YRR P A    DKK DV
Sbjct: 121 DDDRSNYRRGPGAYG-MDKKGDV 142


>AF145693-1|AAD38668.2|  162|Drosophila melanogaster LD32148p
           protein.
          Length = 162

 Score =  181 bits (441), Expect = 3e-46
 Identities = 92/141 (65%), Positives = 106/141 (75%), Gaps = 5/141 (3%)
 Frame = +1

Query: 40  MPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAW 219
           +PK NRV+IYEYLFKEGV+VAKKD    KH +L+KIPNLQVIK MQSL SRG+VKEQFAW
Sbjct: 2   IPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAW 61

Query: 220 RHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPARTAE 384
           RHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+  VR RG  G P       ++T +
Sbjct: 62  RHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDD 121

Query: 385 DRSAYRRAPTAGAPHDKKADV 447
           DRS YRR P A    DKK DV
Sbjct: 122 DRSNYRRGPGAYG-MDKKGDV 141


>AY118800-1|AAM50660.1|  255|Drosophila melanogaster GH19623p
           protein.
          Length = 255

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 281 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 192
           KCR    +++P+F+  + +CL   C++ YP
Sbjct: 76  KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105


>AE013599-635|AAF59104.2|  255|Drosophila melanogaster CG30362-PA
           protein.
          Length = 255

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 281 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 192
           KCR    +++P+F+  + +CL   C++ YP
Sbjct: 76  KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105


>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807


>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807


>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807


>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807


>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807


>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807


>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807


>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807


>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p
           protein.
          Length = 1640

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 758 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 793


>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
           protein.
          Length = 1722

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814


>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
           double-strand-specific ribonucleaseprotein.
          Length = 1722

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
           + V   P E+ +  S + + LH F  +  RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,269,783
Number of Sequences: 53049
Number of extensions: 378343
Number of successful extensions: 974
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)