Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_A10
(551 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 208 3e-55
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 145 3e-36
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 141 7e-35
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 133 1e-32
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 109 2e-25
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 105 6e-24
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 104 1e-23
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 102 3e-23
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 100 3e-22
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 94 1e-20
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 87 1e-18
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 87 2e-18
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 84 1e-17
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 84 2e-17
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 83 3e-17
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 80 2e-16
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 79 4e-16
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 78 1e-15
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 76 4e-15
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 73 2e-14
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 65 7e-12
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 63 2e-11
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 60 3e-10
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 57 2e-09
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 53 2e-08
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 53 2e-08
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 52 4e-08
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 51 1e-07
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 50 3e-07
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 35 0.007
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.20
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 30 0.20
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 28 0.80
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 28 1.1
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 27 2.4
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 26 4.2
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 26 4.2
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 26 4.2
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 25 5.6
SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr 2|||... 25 5.6
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 25 5.6
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 25 5.6
SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces... 25 7.4
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 25 9.8
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 25 9.8
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 25 9.8
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 25 9.8
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 9.8
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 208 bits (509), Expect = 3e-55
Identities = 95/180 (52%), Positives = 138/180 (76%)
Frame = +3
Query: 9 VQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAE 188
+Q+ +GSL L+A+HNI QIV+V +K +L ++E+ +++D K +IF TKR A+
Sbjct: 326 IQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDN--KVLIFTGTKRVAD 383
Query: 189 NITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 368
+ITR +R+ GWPA+ +HGDK Q ERD VL +F+ G+S I+VATDVA+RG+DV GI +V N
Sbjct: 384 DITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFN 443
Query: 369 FDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 548
+D+P ++EDY+HRIGRTGR+ AKGT+Y +FT N++QA++LVS+L EA Q I P+L+ MA
Sbjct: 444 YDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQARELVSILSEAKQDIDPKLEEMA 503
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 145 bits (352), Expect = 3e-36
Identities = 76/170 (44%), Positives = 108/170 (63%)
Frame = +3
Query: 39 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYG 218
S + NI Q V ++ EK + L +L + P T+IFVETKR A+ +T +
Sbjct: 399 STSENITQKVVHVEDSEKRSYLLDILHTL----PPEGLTLIFVETKRMADTLTDYLLNSN 454
Query: 219 WPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDY 398
+PA +HGD+TQ+ER+ L F+ GR+SI+VAT VA+RGLD+ + +VIN+D P +DY
Sbjct: 455 FPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDY 514
Query: 399 IHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 548
+HRIGRTGR+ G + AFF +N AK+L+ +LQEANQ L +MA
Sbjct: 515 VHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFLIAMA 564
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 141 bits (341), Expect = 7e-35
Identities = 76/173 (43%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Frame = +3
Query: 9 VQINIGSLQLSANHNILQIVDVCQE-HEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKA 185
V+I IGS +L+A+ NI QIV++ + KE L+ LL++ + K +IFV K++A
Sbjct: 371 VKITIGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEA 430
Query: 186 ENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVI 365
+ + R + V +HGD +Q R + L FK G+ +LVATDVAARGLD+ ++ VI
Sbjct: 431 ARVEGTLARK-YNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVI 489
Query: 366 NFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQII 524
N +P + EDY+HRIGRTGR+ KGT+ FFTP + A +LV+VL++A Q I
Sbjct: 490 NVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQDKSHAGELVNVLRQAKQDI 542
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 133 bits (322), Expect = 1e-32
Identities = 65/180 (36%), Positives = 108/180 (60%)
Frame = +3
Query: 9 VQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAE 188
V+I +G + A+ + QIV+V E K ++L LL E+ NQ +T++FV+ + A+
Sbjct: 625 VEITVGGRSVVASE-VEQIVEVRPEESKFSRLLELLGELYNNQ-LDVRTLVFVDRQESAD 682
Query: 189 NITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 368
+ ++ + G+ + +HG K Q +RD + +K G +L+AT V ARGLDV ++ V+N
Sbjct: 683 ALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVN 742
Query: 369 FDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 548
+D PN EDY+HR+GRTGR+ G + F TP + A D+ L+ + Q + +LQ++A
Sbjct: 743 YDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTLA 802
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 109 bits (263), Expect = 2e-25
Identities = 57/168 (33%), Positives = 95/168 (56%)
Frame = +3
Query: 9 VQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAE 188
V + IG++ + + + Q V++ + K+ + ++EI ++ IIFV KR E
Sbjct: 475 VMLTIGNIGQAVDR-VEQRVEMISDDSKKWRR---VEEILESNRFSPPIIIFVNLKRNIE 530
Query: 189 NITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 368
I + + GW AV +HG K+Q++R+ + Q + + ILVATD+A RG+D+ + V+N
Sbjct: 531 AIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLN 590
Query: 369 FDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEA 512
++ S EDY HRIGRTGR+ GT+ F P ++ DL +L +
Sbjct: 591 YNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVLLSRS 638
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 105 bits (251), Expect = 6e-24
Identities = 45/114 (39%), Positives = 72/114 (63%)
Frame = +3
Query: 150 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 329
+ +IF ++RK + +T +R + MHG+ Q+ERD ++ F++G S +L+ TD+ A
Sbjct: 262 QAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWA 321
Query: 330 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDL 491
RG+DV + VIN+D P + E+YIHRIGR+GR KG + F T + R +D+
Sbjct: 322 RGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDI 375
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 104 bits (249), Expect = 1e-23
Identities = 54/156 (34%), Positives = 83/156 (53%)
Frame = +3
Query: 48 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPA 227
H + Q +E K K+N LL + NQ +IFV++ +A + R +R +P+
Sbjct: 268 HGLQQHYVKLEEKAKNRKINDLLDSLEFNQ-----VVIFVKSVSRANELDRLLRECNFPS 322
Query: 228 VCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 407
+C+HG Q+ER + FK+ I VATDV RG+D++ + VIN+D P+S + Y+HR
Sbjct: 323 ICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHR 382
Query: 408 IGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEAN 515
+GR GR KG + F + Q D + E N
Sbjct: 383 VGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVN 418
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 102 bits (245), Expect = 3e-23
Identities = 46/114 (40%), Positives = 70/114 (61%)
Frame = +3
Query: 150 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 329
+ +IF T+RK + +T + + MHGD Q +RD ++++F+ G S IL+ TD+ A
Sbjct: 260 QAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLA 319
Query: 330 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDL 491
RG+DV + VIN+D P + E+YIHRIGR GR KG S F T + R +++
Sbjct: 320 RGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREI 373
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 99.5 bits (237), Expect = 3e-22
Identities = 48/135 (35%), Positives = 80/135 (59%)
Frame = +3
Query: 108 VLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFK 287
V+L+++ N + + +IFV+ +A+ + + +HG+ Q +R+E L +F+
Sbjct: 276 VILRQMISNGELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFR 335
Query: 288 EGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPS 467
+G +L+ATD+ ARG+D G+K VINFD+P S YIHRIGRTGR+ G + FFT
Sbjct: 336 KGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKE 395
Query: 468 NSRQAKDLVSVLQEA 512
+ K + V++ +
Sbjct: 396 DGEYIKLIAGVMRSS 410
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 93.9 bits (223), Expect = 1e-20
Identities = 48/110 (43%), Positives = 63/110 (57%)
Frame = +3
Query: 132 NQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILV 311
N+ G IIF T + + +R G+ A+ +HG +Q R L +FK G S LV
Sbjct: 281 NELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLV 340
Query: 312 ATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFT 461
ATDVAARGLD+ + VIN+D P S+ YIHR+GRT R+ G S A T
Sbjct: 341 ATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVT 390
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 87.4 bits (207), Expect = 1e-18
Identities = 45/102 (44%), Positives = 60/102 (58%)
Frame = +3
Query: 156 IIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARG 335
IIFV R AE I +R +H + Q+ER L +F+ + ILVATDVA+RG
Sbjct: 262 IIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRG 321
Query: 336 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFT 461
LD+ ++ VINFD P +DYIHR+GRT R+ G S + T
Sbjct: 322 LDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVT 363
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 87.0 bits (206), Expect = 2e-18
Identities = 43/136 (31%), Positives = 71/136 (52%)
Frame = +3
Query: 54 ILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVC 233
+ Q E +K + LN L ++ NQ +IIF + + E + + I G+
Sbjct: 256 VTQYYAFVDESQKVHCLNTLFSKLQINQ-----SIIFCNSTNRVELLAKKITELGYSCFY 310
Query: 234 MHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 413
H Q R+ V + F+ G LV +D+ RG+D+ + VINFD+P ++E Y+HRIG
Sbjct: 311 SHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIG 370
Query: 414 RTGRSKAKGTSYAFFT 461
R+GR +G + +F +
Sbjct: 371 RSGRFGHRGLAISFIS 386
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 84.2 bits (199), Expect = 1e-17
Identities = 49/178 (27%), Positives = 92/178 (51%)
Frame = +3
Query: 18 NIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENIT 197
+I L L N +I +V +++ L + L+ G T++FV TK E ++
Sbjct: 306 DIIKLPLKDNVRPREIGNVNNPKKRKRALELALK--GSESGSPDSTLVFVPTKHHVEYVS 363
Query: 198 RNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDY 377
+ + G+ ++G Q+ R + F+ G++++LV TDVA+RG+D+ + VIN+D+
Sbjct: 364 ELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRGIDIPLLANVINYDF 423
Query: 378 PNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 551
P + ++HR+GRT R+ G +Y+ ++ DL L S Q+++ +D
Sbjct: 424 PPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLFLNRPLVTSSKQVKTDSD 481
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 83.8 bits (198), Expect = 2e-17
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 6/154 (3%)
Frame = +3
Query: 12 QINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAEN 191
+I + + +LS I Q+ CQ +E+K NVL++ G ++IIF + K AE
Sbjct: 313 EIRLKTEELSVE-GIKQLYMDCQS--EEHKYNVLVELYGLLTI--GQSIIFCKKKDTAEE 367
Query: 192 ITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINF 371
I R + G C+ G+ +RD ++ F+ G S +LV T+V ARG+DV + V+N+
Sbjct: 368 IARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNY 427
Query: 372 DYP------NSSEDYIHRIGRTGRSKAKGTSYAF 455
D P + Y+HRIGRTGR G S F
Sbjct: 428 DMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINF 461
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 83.0 bits (196), Expect = 3e-17
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +3
Query: 150 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 329
K I+F+ + + + + P + +HG + QQ R ++F IL+ T+VAA
Sbjct: 338 KVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAA 397
Query: 330 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR-SKAKGTSYAFFTPS 467
RGLD+ + +++ +D P+ DYIHR+GRT R +K G S F PS
Sbjct: 398 RGLDIPAVDWIVQYDPPDDPRDYIHRVGRTARGTKGTGKSLMFLAPS 444
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 80.2 bits (189), Expect = 2e-16
Identities = 38/97 (39%), Positives = 60/97 (61%)
Frame = +3
Query: 150 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 329
+TIIF +K A + A +HG +Q++R L F++G+ + L+ATDVA+
Sbjct: 506 RTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVAS 565
Query: 330 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKG 440
RG+D+ GI+ VIN++ P + E Y+HR+GRT R+ G
Sbjct: 566 RGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSG 602
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 79.0 bits (186), Expect = 4e-16
Identities = 47/153 (30%), Positives = 76/153 (49%)
Frame = +3
Query: 33 QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRR 212
Q + +L+ + C EK+ L L+ PG KT++F + IT +
Sbjct: 358 QSAVASRVLEGLIECAPAEKDLYLYYLIMRY-----PG-KTMVFANGIEDIKRITPFLNE 411
Query: 213 YGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSE 392
P+ +H Q++R + L +FK +LV TDVAARG+D+ + +VI++ P++++
Sbjct: 412 LKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAARGIDIPSVTHVIHYHVPHTAD 471
Query: 393 DYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDL 491
Y+HR GRT R+ G S P Q K L
Sbjct: 472 MYVHRSGRTARANEDGVSILMCGPKELSQLKRL 504
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 77.8 bits (183), Expect = 1e-15
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +3
Query: 150 KTIIFVETKRKAENITRNIRRY--GWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDV 323
KTI+F+ + ++ + RR G + +HG + Q R EV +F R +L TD+
Sbjct: 285 KTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDI 344
Query: 324 AARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 497
ARGLD + +VI D P + YIHR+GRT R G + PS K L S
Sbjct: 345 VARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLPSEEAFLKRLES 402
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 75.8 bits (178), Expect = 4e-15
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +3
Query: 111 LLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY-GWPAVCMHGDKTQQERDEVLYQFK 287
LLQ++ + +P ++ I+F+ T + + + + P +H T +R + F+
Sbjct: 282 LLQQL-TSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESFR 340
Query: 288 EGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSY 449
+ +S IL ATDV ARG+D I V+ P++++DYIHRIGRTGR+ G +Y
Sbjct: 341 KCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAY 394
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 73.3 bits (172), Expect = 2e-14
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = +3
Query: 234 MHGDKTQQERDEVLYQFKEGRSS---ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 404
+HG +QQ R L F S IL+ TDVAARGLD+ + V+ +D P S++DY+H
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLH 532
Query: 405 RIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISP 530
RIGRT R+ G + F P S L S + AN + P
Sbjct: 533 RIGRTARAGHNGAAIMFLLPKESEYINLLKSSV-SANILEQP 573
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 64.9 bits (151), Expect = 7e-12
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Frame = +3
Query: 150 KTIIFVETKRKAENITRNIRRYGWP--AVCMHGDKTQQERDEVLYQFKEG-RSSILVATD 320
K I+F + E Y P V +HG + Q R +FK+ + ++L TD
Sbjct: 258 KAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKKTVLFTTD 317
Query: 321 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSV 500
+A+RGLD+ + +V+ D P + + HR GR GR+ G + + ++L+ V
Sbjct: 318 IASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVAIVLLNDGREEEYEELLRV 377
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 63.3 bits (147), Expect = 2e-11
Identities = 30/86 (34%), Positives = 49/86 (56%)
Frame = +3
Query: 249 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 428
++ ER +++ +F G ++LV +D+ ARG+DV + VIN+D P S Y+HRIGRT R+
Sbjct: 472 SRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRSYVHRIGRTARA 531
Query: 429 KAKGTSYAFFTPSNSRQAKDLVSVLQ 506
+G ++ LV L+
Sbjct: 532 GREGFAWTLVQSHEGHHFSKLVKQLR 557
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 59.7 bits (138), Expect = 3e-10
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Frame = +3
Query: 84 HEKENKLNVLLQE-IGQNQDPGAKTIIFVETKRKAENITRNIRRY----------GWPAV 230
H K L ++ E + Q + +IFVE + AE I R + ++ G AV
Sbjct: 411 HPKLEHLERIVTEYFEKEQTKDTRIMIFVEIRSSAEEILRFLGKFYPNVRPAIFIGQSAV 470
Query: 231 CMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 410
+Q+ ++E + QF++G + L+AT + GLD+ + +I +D S + R+
Sbjct: 471 RKAAGMSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRM 530
Query: 411 GRTGRSKAKGTSYAFFTPSNS----RQAKDLVSVLQE 509
GRTGR K KG Y T +AKD LQ+
Sbjct: 531 GRTGR-KRKGYIYMLLTRGKEEAKWERAKDAYRTLQD 566
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 56.8 bits (131), Expect = 2e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 327 ARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTPSN 470
ARGLD + + V+NFD P++++ YIHRIGRT R+ GT+ +F P +
Sbjct: 387 ARGLDFENVACVLNFDMPSNTKSYIHRIGRTARAGKPGTAMSFVVPKS 434
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 53.2 bits (122), Expect = 2e-08
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Frame = +3
Query: 39 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRR-- 212
+A NI + E L L++ + G + IIF TK+ E I R + +
Sbjct: 1381 TARENIFYFLHPYDNTEFLLDLRTLMKRTKVFEGDG-RAIIFCRTKKDVEYIHRRLHQSD 1439
Query: 213 -YGWPAVCMH-GDKTQQERDEVLYQFKE--GRSSILVATDVAARGLDVDGIKYVINFDYP 380
+ V ++ GD + +ER F+ G++ I++AT G++ G++ V+++ P
Sbjct: 1440 LFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLP 1499
Query: 381 NSSEDYIHRIGRTGRSKAKGTSYAFFTPSNS 473
SS DY+ GR GR + F+ +S
Sbjct: 1500 ASSMDYVQETGRAGRDGKYAIAALFYEKYDS 1530
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 53.2 bits (122), Expect = 2e-08
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Frame = +3
Query: 39 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRR-- 212
+A NI + E L L++ + G + IIF TK+ E I R + +
Sbjct: 1381 TARENIFYFLHPYDNTEFLLDLRTLMKRTKVFEGDG-RAIIFCRTKKDVEYIHRRLHQSD 1439
Query: 213 -YGWPAVCMH-GDKTQQERDEVLYQFKE--GRSSILVATDVAARGLDVDGIKYVINFDYP 380
+ V ++ GD + +ER F+ G++ I++AT G++ G++ V+++ P
Sbjct: 1440 LFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLP 1499
Query: 381 NSSEDYIHRIGRTGRSKAKGTSYAFFTPSNS 473
SS DY+ GR GR + F+ +S
Sbjct: 1500 ASSMDYVQETGRAGRDGKYAIAALFYEKYDS 1530
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 52.4 bits (120), Expect = 4e-08
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +3
Query: 156 IIFVETKRKAENITRNIRR-YGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAAR 332
II+ ++ E + +R YG A H + ER + +++ G I+VAT
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 333 GLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFT 461
G+D +++VI+ +P S E Y GR GR F++
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYS 848
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 50.8 bits (116), Expect = 1e-07
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Frame = +3
Query: 48 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPG---AKTIIFVETKRKAENITRNIRRY- 215
HN +Q + + H K N L LL+E ++ G + +IF E + AE IT +
Sbjct: 438 HNKIQGLSL--NHPKMNHLLELLKEHFKDTSEGYQNQRVMIFTEFRNTAEYITTTLLAIR 495
Query: 216 ---------GWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 368
G Q ++ E + QF+ G + LVAT + GLD+ +I
Sbjct: 496 PMVRASLFIGQANSAYSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIIC 555
Query: 369 FDYPNSSEDYIHRIGRTGRSKA 434
+D +S I R+GRTGR K+
Sbjct: 556 YDASSSPIRTIQRMGRTGRKKS 577
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 49.6 bits (113), Expect = 3e-07
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Frame = +3
Query: 39 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYG 218
S N + + D +K KL LL+ + D +T+IFVE K A ++ ++
Sbjct: 327 SDNGPRIPVFDSTDVTDKVFKLLELLKATYRKSD-SVRTVIFVERKATAFTLSLFMKTLN 385
Query: 219 WPAVCMH-----GDKTQQE-------RDEVLYQFKEGRSSILVATDVAARGLDVDGIKYV 362
P + H G Q E + + L++FK G+ ++L+AT VA G+DV V
Sbjct: 386 LPNIRAHSFIGHGPSDQGEFSMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLV 445
Query: 363 INFDYPNSSEDYIHRIGRTGRSKAKGTSYAFF 458
I F+ + Y+ GR++A + + F
Sbjct: 446 IRFNICRTVTQYVQ---SRGRARAMASKFLIF 474
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 35.1 bits (77), Expect = 0.007
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 249 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 425
T QER ++ + G+ ++AT+ G+D+ + VI +P S + + GR GR
Sbjct: 595 TVQERRKIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGR 653
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 30.3 bits (65), Expect = 0.20
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 378 PNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISP 530
P SS+ + I K + F PSNS KDL +V ++ N++ SP
Sbjct: 246 PLSSQQILPAISNNTSEKPDSNNCGFLLPSNSTSIKDLKNV-KKGNRLNSP 295
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 30.3 bits (65), Expect = 0.20
Identities = 22/112 (19%), Positives = 51/112 (45%)
Frame = +3
Query: 33 QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRR 212
Q A++ ++ V Q H E ++L+ GQ + + I++ +K ++I +
Sbjct: 697 QPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELV-- 754
Query: 213 YGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 368
+ ++ + + + G +++AT++A L +DGI YV++
Sbjct: 755 ----ILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVD 802
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 28.3 bits (60), Expect = 0.80
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 291 GRSSILVATDVAARGLDVDGIKYVINFDY 377
G ++VAT++A L V GI YV++ Y
Sbjct: 757 GVRKVVVATNIAETSLTVHGISYVVDTGY 785
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 249 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 368
T +++ +V EG +VAT+VA + + I+YV++
Sbjct: 712 TTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVD 751
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +3
Query: 234 MHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 368
+H T E+ V + ++ +T++A + +DGI YV++
Sbjct: 275 LHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVD 319
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 287 FKLV*YFIPFLLCFVTVHAHSWPSIS 210
+KL +PFL V HA WPS++
Sbjct: 30 YKLWKQNVPFLYDLVITHALEWPSLT 55
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 4.2
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +3
Query: 303 ILVATDVAARGLDVDGIKYVIN 368
++++T++A L +DGI YV++
Sbjct: 354 VVISTNIAETSLTIDGIVYVVD 375
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 416 PTNSMNVILRGIWIIKINHIFDSIHIKTSGSN-ISCYKYTGTTLFK 282
PTN L ++K + +S+ ++TSG N I +K T FK
Sbjct: 216 PTNKETQFLAVGGMLKFSETTESVFMRTSGRNQIQLWKLENKTNFK 261
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 25.4 bits (53), Expect = 5.6
Identities = 19/99 (19%), Positives = 46/99 (46%)
Frame = +3
Query: 72 VCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKT 251
+ Q H K ++L+ GQ++ + +I +K+ N+ + A +
Sbjct: 295 IFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQI------QACPLFASLP 348
Query: 252 QQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 368
Q+++ +V ++++T++A + + GI+YVI+
Sbjct: 349 QEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVID 387
>SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +3
Query: 303 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFTP 464
+ VA RGL + I ++ + S Y H GR G G + F P
Sbjct: 474 VFVANPSEIRGLHLPSITHIFHLWSTFSGVAYQHIAGRLGAMGQTGKIFNFIIP 527
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 25.4 bits (53), Expect = 5.6
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 339 DVDGIKYVINFDYPNSSEDYIHRIGRTGRSKA---KGTSYAFFTPSNSRQAKDLVSVLQE 509
++D I+ + F+ N +D I G+ K KG + A PSN+ ++ + +
Sbjct: 203 ELDDIETIKLFEELNEMKDEIDAHIEGGKCKEVLRKGINVAILGPSNAGKSSLINLLANR 262
Query: 510 ANQIISPQLQSMAD 551
I+SPQ + D
Sbjct: 263 RISIVSPQSGTTRD 276
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 133 TKTLVQR-PLYLLKLKEKRRTLPEISD 210
+KTL + Y L LKEKR LP +SD
Sbjct: 89 SKTLKKHLEAYELALKEKRLKLPNVSD 115
>SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 350
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 336 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTS 446
L +D + I YP S EDY + R SK S
Sbjct: 146 LIIDNLSMPIQLAYPTSPEDYAYLRLRRNTSKKSSLS 182
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 24.6 bits (51), Expect = 9.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +2
Query: 185 GEHYQKYQTIWMASCVH 235
GE+Y+K + IW C++
Sbjct: 14 GENYEKNKDIWRRQCIY 30
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 346 STSRPLAATSVATSILERPSLNWYNTSSLSCCVLSP 239
S + PLA+ A ++ RP L+W + ++ SP
Sbjct: 371 SAAAPLASAVYALALSIRPDLSWRDIQHITVYSASP 406
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 345 DGIKYVINFDYPNSS--EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ 479
DG K+V++ DYP+ + ++ H + + +K ++ + SN ++
Sbjct: 97 DGAKFVVSTDYPDPALIDNLEHNVKQYAEIASKISAVGYLWGSNIKE 143
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = -2
Query: 511 ASCKTETRSLAWRELDGVKNA---YEVPLAL 428
A+C ETR W+ L G+ N+ + +PL +
Sbjct: 482 AACGRETRVGRWKTLRGIPNSGFVFNIPLTV 512
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 157 LYLLKLKEKRRTLPEISDDMDG 222
LYL L+EKRRT +S+ +G
Sbjct: 213 LYLESLREKRRTYTPLSEISNG 234
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,391,827
Number of Sequences: 5004
Number of extensions: 50634
Number of successful extensions: 203
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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