Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_A05
(373 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 53 6e-08
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 52 1e-07
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 50 5e-07
Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical pr... 34 0.037
Z81581-9|CAN86610.1| 307|Caenorhabditis elegans Hypothetical pr... 32 0.11
Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical pr... 31 0.35
U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical pr... 28 1.9
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 28 2.4
Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical p... 27 3.2
U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical pr... 27 3.2
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 27 3.2
AC084158-16|AAK68571.2| 347|Caenorhabditis elegans Hypothetical... 27 3.2
Z81062-3|CAB02948.2| 325|Caenorhabditis elegans Hypothetical pr... 27 4.3
AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 27 4.3
Z81109-16|CAB03252.2| 221|Caenorhabditis elegans Hypothetical p... 27 5.7
AC024817-24|AAF59584.3| 237|Caenorhabditis elegans C-type lecti... 27 5.7
AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical ... 26 7.5
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 26 7.5
AC006722-2|AAK68422.1| 296|Caenorhabditis elegans Hypothetical ... 26 7.5
AC006645-7|AAF39840.1| 296|Caenorhabditis elegans Hypothetical ... 26 7.5
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 26 9.9
U41996-3|AAA83472.2| 362|Caenorhabditis elegans More of ms prot... 26 9.9
L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical pr... 26 9.9
AL021497-10|CAD56614.1| 490|Caenorhabditis elegans Hypothetical... 26 9.9
AL021497-9|CAA16397.1| 487|Caenorhabditis elegans Hypothetical ... 26 9.9
AF016433-2|AAB65389.1| 336|Caenorhabditis elegans Seven tm rece... 26 9.9
AF013952-1|AAC47749.1| 362|Caenorhabditis elegans mom-2 protein. 26 9.9
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 53.2 bits (122), Expect = 6e-08
Identities = 34/112 (30%), Positives = 57/112 (50%)
Frame = +1
Query: 10 SAPLLAWYLWTQRRHLRGLRVLELGCGTGLPGILAAKCGARVVLTDSVALPRSLRHLSSC 189
SA + Y + + G +VLELG GTG+ GI A GA V++TD LP L +
Sbjct: 37 SALMTIHYFFKYPKPFEGKKVLELGSGTGVGGIALAALGADVIITD---LPERLALIEKN 93
Query: 190 CEANGLVPNRDVQIVGLSWGLFLSEIHNLQPVDLLLASDCFYEPTQFEEVLS 345
EAN + +++ L W ++ + +D++LA DC Y + + +++
Sbjct: 94 VEANRKLTGNRIKVQVLDW----TKDRIPEGLDMVLAIDCVYYNSTIDPLIT 141
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 52.0 bits (119), Expect = 1e-07
Identities = 32/105 (30%), Positives = 54/105 (51%)
Frame = +1
Query: 31 YLWTQRRHLRGLRVLELGCGTGLPGILAAKCGARVVLTDSVALPRSLRHLSSCCEANGLV 210
Y + + G +VLELG GTG+ GI A GA V++TD LP L + EAN +
Sbjct: 5 YFFKYPKPFEGKKVLELGSGTGVGGIALAALGADVIITD---LPERLALIEKNVEANRKL 61
Query: 211 PNRDVQIVGLSWGLFLSEIHNLQPVDLLLASDCFYEPTQFEEVLS 345
+++ L W ++ + +D++LA DC Y + + +++
Sbjct: 62 TGNRIKVQVLDW----TKDRIPEGLDMVLAIDCVYYNSTIDPLIT 102
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 50.0 bits (114), Expect = 5e-07
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Frame = +1
Query: 13 APLLAWYLWTQRRHLRGLRVLELGCG-TGLPGILAAKCGA-RVVLTDSVALPRSLRHLSS 186
A + + +L + + + VLE+G G TG+ G+ AK GA V +TD L +L L
Sbjct: 16 AQVFSDFLCSNQELIEDKLVLEIGAGATGVCGLTTAKLGAANVWMTDHPKLEAALETLQR 75
Query: 187 CCEANGLVPNRDVQIVGLSWG--LFLSEIHNL---QPVDLLLASDCFYEPTQFEEVLSTV 351
EANG+ + GL W +S + + + +D+++ASD F++P+ F ++ T
Sbjct: 76 NIEANGVAEK--CIVTGLDWESRASVSAVCDQIGDRHLDVIIASDVFFDPSTFCPLIDTF 133
Query: 352 AYLL 363
A LL
Sbjct: 134 AQLL 137
>Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical
protein K01A11.2 protein.
Length = 229
Score = 33.9 bits (74), Expect = 0.037
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 31 YLWTQRRHLRGLRVLELGCGTGLPGILAAKCGARVV 138
Y+ + G VLELGCG LP IL A GA+ V
Sbjct: 66 YIEENQTLFAGKSVLELGCGAALPSILTAVHGAKEV 101
>Z81581-9|CAN86610.1| 307|Caenorhabditis elegans Hypothetical
protein T02E1.5a protein.
Length = 307
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +1
Query: 37 WTQRRHLRGLRVLELGCGTGLPGILA---AKCGARVVLTD 147
W R+ +RG VL G G+GL ++A K GAR+VL D
Sbjct: 31 WLLRKDVRGQTVLITGSGSGLGRLMAFEFGKLGARLVLWD 70
>Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical
protein R08D7.4 protein.
Length = 371
Score = 30.7 bits (66), Expect = 0.35
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Frame = +1
Query: 67 RVLELGCGTGLPGILAAKCG-ARVVLT---DSV--ALPRSL--RHLSSCCEANGLVPNRD 222
R+LELG G G+ GI AK V LT D+V L ++ L S E + N
Sbjct: 188 RILELGSGCGVSGIAIAKMNDCCVTLTDYDDNVLNLLEENIAKNDLKSDTE-DSSANNNQ 246
Query: 223 VQIVGLSWGLF-LSEIHNLQPVDLLLASDCFYEPTQFEEVLSTVAYLL 363
+ L+W F SE +P DL++A+D Y+ + + + LL
Sbjct: 247 ATVRSLNWCDFDFSEWK--EPTDLIIAADVVYDTALLASLCNVLNLLL 292
>U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical
protein C37A2.6 protein.
Length = 244
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 22 LAWYLWTQRRHLRGLRVLELGCGTGLPGILAAKCGARVVLTDSV 153
L+ ++ + +G +++ G G G I A+ CGA+ +L + +
Sbjct: 64 LSRFILDNKPLFQGSEIVDFGAGCGSASISASICGAKKILANDI 107
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 52 HLRGLRVLELGCGTGLPGILAAKCGARVVL 141
+L+ +VL++GCG GL + GAR V+
Sbjct: 35 NLKDKKVLDIGCGNGLNSTTFLQWGARKVV 64
>Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical
protein F01D4.3 protein.
Length = 561
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = -1
Query: 373 QYPQVGKLRWKVPLRTESVRKNNQKLEVSLQVEDCESRIKRGPTIGRLFARHGWVPSRWL 194
+YP K + K R V + +K++V ED + +++ HG++P L
Sbjct: 107 KYPDGDKKKKKKKTRRARVSVSMEKVDVVTDREDKKMKLRE------FNFYHGFLPREDL 160
Query: 193 HNTMINVAEILAR 155
H+T+ N + L R
Sbjct: 161 HSTLHNSGDYLIR 173
>U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical
protein T05A12.3 protein.
Length = 655
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = -3
Query: 311 KQSEARSKSTG*RL*ISDKKRPHDRPTICTSRLGTKPLASQHDDKCRRDLGKATLSVRTT 132
K+ + R + +L I +K+R R +S+ +KP +S H++ G + + +
Sbjct: 320 KEKQERQREVE-KLRIKEKEREKARAASSSSQKSSKPSSSSHNNGSTSSNGHSAPAKKEV 378
Query: 131 RAPHFAAKIPGKPVP 87
R P P +P
Sbjct: 379 RKPFQKGPTPPPLIP 393
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 70 VLELGCGTGLPGILAAKCGARVV 138
V+++G GTG+ + AAK GA+ V
Sbjct: 66 VMDVGSGTGILSMFAAKAGAKKV 88
>AC084158-16|AAK68571.2| 347|Caenorhabditis elegans Hypothetical
protein Y69A2AR.26 protein.
Length = 347
Score = 27.5 bits (58), Expect = 3.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 160 ARQRCLSEQRAHHTSPPRSQVNLFR 86
+R +CL+E H P R ++LF+
Sbjct: 263 SRAKCLTEMLQHRNDPERQSISLFK 287
>Z81062-3|CAB02948.2| 325|Caenorhabditis elegans Hypothetical
protein F15A4.4 protein.
Length = 325
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 223 VQIVGLSWGLFLSEIHNLQPVDLLLASDCFYEPTQF 330
V +V + WG+F + + P L S F+EP+ F
Sbjct: 66 VSLVLIFWGIFFNRLFMFIPPLCPLVSPLFFEPSLF 101
>AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective
spermatogenesis protein 8 protein.
Length = 512
Score = 27.1 bits (57), Expect = 4.3
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = -3
Query: 296 RSKSTG*RL*ISDKKRPHDRPTICTSRLGTKPLASQHDDKCRRDLGKATLSVRTTRAPHF 117
RSKS+ L D + D+ T T TKP + + +L K + + P
Sbjct: 2 RSKSSEGDLQPEDTQSREDKETTATYSEDTKPETQKERNAALDNLAKTPIQLVVQPTPLT 61
Query: 116 AAKIPGK-----PVPQPSSRTRNPRK 54
A P + P P+PSS N ++
Sbjct: 62 PAITPCEAPPPPPPPKPSSDNNNSKR 87
>Z81109-16|CAB03252.2| 221|Caenorhabditis elegans Hypothetical
protein R10D12.9 protein.
Length = 221
Score = 26.6 bits (56), Expect = 5.7
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = -1
Query: 241 IGRLFARHGWVPSRWLHNTMINVAEILARQRCLSEQRAHHTSPPRSQVNLFRNRVLELVI 62
I + RHGW+ + W H +IN + A +S A++ S ++ NL + ++I
Sbjct: 48 IQSFWLRHGWMTNEWTH-IIINTVNLTALSFYISAY-AYYQS---NRKNLIGQLISAVII 102
Query: 61 HVSVFF 44
FF
Sbjct: 103 VKCAFF 108
>AC024817-24|AAF59584.3| 237|Caenorhabditis elegans C-type lectin
protein 83 protein.
Length = 237
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 51 TLTWITSSRTRLRNRFTWDLGGEVW 125
+L WI SR +RFTWD G ++
Sbjct: 82 SLFWIGLSRASSSSRFTWDDGSVMY 106
>AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical
protein C36C9.5 protein.
Length = 484
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 191 QHDDKCRRDLGKATLSVRTTRAPHFAAKIPGKPVPQPS 78
QH+D+ R L + R T HF KI P+P+P+
Sbjct: 358 QHNDRTYRMLHNSMSGARGT---HFHLKISSLPLPKPN 392
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -3
Query: 266 ISDKKRPHDRPTICTSRLGTKPLASQHDDKCRRDLGKATLSVRTTRAPHFAAKIP 102
+ K P D I T+P + +DD + D G+ ++ + A H A++P
Sbjct: 108 VCHKVVPSDDADIHLVMCLTRPKITYNDDVLKDDKGECSICLEDLEAGHKIARLP 162
>AC006722-2|AAK68422.1| 296|Caenorhabditis elegans Hypothetical
protein Y19D10A.9 protein.
Length = 296
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 18 VASLVSLDAKKTLTWITSSRTRLRNRFTWDLG 113
+AS+V T WI SR +RF WD G
Sbjct: 66 LASIVRSQTGATKFWIGLSRATPSSRFQWDDG 97
>AC006645-7|AAF39840.1| 296|Caenorhabditis elegans Hypothetical
protein F56A4.2 protein.
Length = 296
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 18 VASLVSLDAKKTLTWITSSRTRLRNRFTWDLG 113
+AS+V T WI SR +RF WD G
Sbjct: 66 LASIVRSQTGATKFWIGLSRATPSSRFQWDDG 97
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 137 TTRAPHFAAKIPGKPVPQPSSRTRN 63
TT +PHFA PG + PS + N
Sbjct: 400 TTSSPHFAPGAPGADLRSPSLMSPN 424
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 137 TTRAPHFAAKIPGKPVPQPSSRTRN 63
TT +PHFA PG + PS + N
Sbjct: 398 TTSSPHFAPGAPGADLRSPSLMSPN 422
>U41996-3|AAA83472.2| 362|Caenorhabditis elegans More of ms protein
2 protein.
Length = 362
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 124 HTSPPRSQVNLFRNRV 77
H + PRSQ+NL NRV
Sbjct: 189 HATEPRSQMNLHNNRV 204
>L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical
protein F22B7.9 protein.
Length = 243
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 61 GLRVLELGCGTGLPGILAAKCGARVV 138
G VLE+G TGLP + A + GA +
Sbjct: 84 GKSVLEIGFVTGLPSVYAFENGAEEI 109
>AL021497-10|CAD56614.1| 490|Caenorhabditis elegans Hypothetical
protein Y51A2D.13b protein.
Length = 490
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 316 RKNNQKLEVSLQVEDCE 266
R NQK+E+ + VEDCE
Sbjct: 203 RSLNQKMELGVLVEDCE 219
>AL021497-9|CAA16397.1| 487|Caenorhabditis elegans Hypothetical
protein Y51A2D.13a protein.
Length = 487
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 316 RKNNQKLEVSLQVEDCE 266
R NQK+E+ + VEDCE
Sbjct: 200 RSLNQKMELGVLVEDCE 216
>AF016433-2|AAB65389.1| 336|Caenorhabditis elegans Seven tm
receptor protein 143 protein.
Length = 336
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 84 LRNRFTWDL--GGEVWCARCSDRQRCLAKISATF 179
L + FT+D+ G E+ C CS C++ ++A F
Sbjct: 78 LDSPFTFDVSTGNEITCLYCSSFALCISLLAAQF 111
>AF013952-1|AAC47749.1| 362|Caenorhabditis elegans mom-2 protein.
Length = 362
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 124 HTSPPRSQVNLFRNRV 77
H + PRSQ+NL NRV
Sbjct: 189 HATEPRSQMNLHNNRV 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,922,361
Number of Sequences: 27780
Number of extensions: 179264
Number of successful extensions: 596
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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