Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_A04
(256 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118429-1|AAM48458.1| 163|Drosophila melanogaster RH26504p pro... 26 8.0
AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.... 26 8.0
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro... 26 8.0
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB... 26 8.0
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD... 26 8.0
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA... 26 8.0
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE... 26 8.0
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC... 26 8.0
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 26 8.0
AE014296-3393|AAN12138.1| 163|Drosophila melanogaster CG5104-PB... 26 8.0
>AY118429-1|AAM48458.1| 163|Drosophila melanogaster RH26504p
protein.
Length = 163
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 24 TFETSNNVVGFIKCVPLTVSLSLY*NISLFI 116
T S + GF+ C L + LSL +++LF+
Sbjct: 30 TLSWSTRIKGFVICFALGILLSLLGSVALFL 60
>AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1
protein.
Length = 2447
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 73 KGTHFINPTTLLLVSNV 23
+GTHF+NP T++ V V
Sbjct: 1417 RGTHFVNPDTIVTVRPV 1433
>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan protein.
Length = 4223
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 73 KGTHFINPTTLLLVSNV 23
+GTHF+NP T++ V V
Sbjct: 1408 RGTHFVNPDTIVTVRPV 1424
>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
isoform B protein.
Length = 3215
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 73 KGTHFINPTTLLLVSNV 23
+GTHF+NP T++ V V
Sbjct: 1302 RGTHFVNPDTIVTVRPV 1318
>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
isoform D protein.
Length = 4223
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 73 KGTHFINPTTLLLVSNV 23
+GTHF+NP T++ V V
Sbjct: 1408 RGTHFVNPDTIVTVRPV 1424
>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
isoform A protein.
Length = 4179
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 73 KGTHFINPTTLLLVSNV 23
+GTHF+NP T++ V V
Sbjct: 1302 RGTHFVNPDTIVTVRPV 1318
>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
isoform E protein.
Length = 4228
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 73 KGTHFINPTTLLLVSNV 23
+GTHF+NP T++ V V
Sbjct: 1302 RGTHFVNPDTIVTVRPV 1318
>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
isoform C protein.
Length = 4117
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 73 KGTHFINPTTLLLVSNV 23
+GTHF+NP T++ V V
Sbjct: 1302 RGTHFVNPDTIVTVRPV 1318
>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
isoform F protein.
Length = 4629
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 73 KGTHFINPTTLLLVSNV 23
+GTHF+NP T++ V V
Sbjct: 1814 RGTHFVNPDTIVTVRPV 1830
>AE014296-3393|AAN12138.1| 163|Drosophila melanogaster CG5104-PB
protein.
Length = 163
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 24 TFETSNNVVGFIKCVPLTVSLSLY*NISLFI 116
T S + GF+ C L + LSL +++LF+
Sbjct: 30 TLSWSTRIKGFVICFALGILLSLLGSVALFL 60
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,394,170
Number of Sequences: 53049
Number of extensions: 116419
Number of successful extensions: 254
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 431864640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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