Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P24
(151 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 23 1.7
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 22 2.3
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 22 3.0
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 22 3.0
AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding pr... 21 6.9
AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding pr... 21 6.9
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 21 6.9
AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding pr... 21 6.9
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 21 6.9
AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced ... 21 6.9
AJ439060-6|CAD27757.1| 297|Anopheles gambiae hypothetical prote... 20 9.1
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 20 9.1
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 22.6 bits (46), Expect = 1.7
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Frame = +2
Query: 38 EGAGRKKT-----ATAEERRLQPPKKEDCNRRRKKT 130
E AGR +T A RR +PP + +RRR T
Sbjct: 316 EAAGRLRTGPVPGAAERHRRRRPPPRRRHDRRRYPT 351
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 22.2 bits (45), Expect = 2.3
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 24 RHEGKKELEERRLQPPKKEDCNR-RRKKTATAEERRLQSPKKE 149
R ++E E+R + +KE+ R +R+K E+R + ++E
Sbjct: 478 REREQREKEQREKEQREKEERERQQREKEQREREQREKERERE 520
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 21.8 bits (44), Expect = 3.0
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Frame = +3
Query: 9 RAAGIRHEGKKELEERR-------LQPPKKEDCNRRRKKTATAEERRLQSPKKE 149
+AAG+ KK +R + P R +TAT R L+S KKE
Sbjct: 541 KAAGMEKSRKKRGAPKRKATSPPAVATPPSTSRARTATRTATTTTRALRSAKKE 594
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 21.8 bits (44), Expect = 3.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 50 RKKTATAEERRLQPPKKEDCNRRRKKTAIAEE 145
+++TA EE KED NR + + +AEE
Sbjct: 159 KERTALFEEISGSGLLKEDYNRLKHEMQMAEE 190
>AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding
protein AgamOBP30 protein.
Length = 289
Score = 20.6 bits (41), Expect = 6.9
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +1
Query: 10 GLQEFGTRGRRSWKKEDCNRRRKKTATAEERRLQPPKKED--CNR 138
G+QE R DC+ R+ +RL P D C R
Sbjct: 102 GVQEASMRSFFHPDPNDCDYERRTYRCLHSQRLDRPAPHDEACER 146
>AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding
protein OBPjj83c protein.
Length = 273
Score = 20.6 bits (41), Expect = 6.9
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +1
Query: 10 GLQEFGTRGRRSWKKEDCNRRRKKTATAEERRLQPPKKED--CNR 138
G+QE R DC+ R+ +RL P D C R
Sbjct: 86 GVQEASMRSFFHPDPNDCDYERRTYRCLHSQRLDRPAPHDEACER 130
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 20.6 bits (41), Expect = 6.9
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +2
Query: 2 DPPGCRNSARGEEGAGRKKTATAEERRLQPPK 97
D CR + K TA+E R PPK
Sbjct: 734 DEDDCRFEFSYNDSDQDKVVVTAQENRECPPK 765
>AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding
protein 1 protein.
Length = 289
Score = 20.6 bits (41), Expect = 6.9
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +1
Query: 10 GLQEFGTRGRRSWKKEDCNRRRKKTATAEERRLQPPKKED--CNR 138
G+QE R DC+ R+ +RL P D C R
Sbjct: 102 GVQEASMRSFFHPDPNDCDYERRTYRCLHSQRLDRPAPHDEACER 146
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 52 KEDCNRRRKKTATAEERRLQPPKKEDCN 135
K DC T T+ R K E+C+
Sbjct: 214 KRDCPMESNNTPTSTTMRDYSRKNENCS 241
>AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced
homeotic protein protein.
Length = 372
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/42 (21%), Positives = 22/42 (52%)
Frame = +2
Query: 20 NSARGEEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEE 145
+++ G G G + T + +LQP K +++ ++A+ +
Sbjct: 83 SASTGAVGGGHQSTDMVDYTQLQPQKFLLSQQQQPQSALTSQ 124
>AJ439060-6|CAD27757.1| 297|Anopheles gambiae hypothetical protein
protein.
Length = 297
Score = 20.2 bits (40), Expect = 9.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +2
Query: 23 SARGEEGAGRKKTATAEERRLQPPKKEDC 109
S +GE + EE L+ PKK C
Sbjct: 268 SFKGERYTEVSRRGGEEETELKKPKKPIC 296
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 70 RRKKTATAEERRLQPPKKEDCNRRRKK 150
RR T + RL PP RR++
Sbjct: 1066 RRAATQQRQAERLPPPPPSPRTERRRE 1092
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.314 0.131 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,029
Number of Sequences: 2352
Number of extensions: 1669
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 29
effective length of database: 495,771
effective search space used: 9915420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
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