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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P24
         (151 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    25   0.11 
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    25   0.11 
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    25   0.11 
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    25   0.11 
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    25   0.11 
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    25   0.11 
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   1.0  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   1.8  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   1.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   2.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          20   3.1  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          19   4.1  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          19   4.1  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          19   4.1  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          19   4.1  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          19   4.1  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          19   4.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    19   4.1  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    19   7.1  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    19   7.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    19   7.1  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    19   7.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    18   9.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          18   9.4  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 0.11
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 35  EEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           EE   RK+ + + ER  +  K E+  R+ +KT+    R
Sbjct: 31  EERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 0.11
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 35  EEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           EE   RK+ + + ER  +  K E+  R+ +KT+    R
Sbjct: 31  EERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 0.11
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 35  EEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           EE   RK+ + + ER  +  K E+  R+ +KT+    R
Sbjct: 31  EERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 0.11
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 35  EEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           EE   RK+ + + ER  +  K E+  R+ +KT+    R
Sbjct: 31  EERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 0.11
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 35  EEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           EE   RK+ + + ER  +  K E+  R+ +KT+    R
Sbjct: 31  EERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 0.11
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 35  EEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           EE   RK+ + + ER  +  K E+  R+ +KT+    R
Sbjct: 31  EERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 54  RRLQPPKKEDCNRRRKKT 107
           R+  P +KE   RRR++T
Sbjct: 397 RQTPPSRKESGRRRRRRT 414



 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 77  RRLQPPKKEDCNRRRKKT 130
           R+  P +KE   RRR++T
Sbjct: 397 RQTPPSRKESGRRRRRRT 414



 Score = 21.0 bits (42), Expect = 1.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 30  EGKKELEERRLQPPKKEDCNRRRKKTA 110
           E   + EE   +P KKE   +  K+TA
Sbjct: 318 ETSSDEEEADTRPLKKEPITQSNKRTA 344



 Score = 20.2 bits (40), Expect = 2.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 71  EERRLQPPKKEDCNRRRKKTA 133
           EE   +P KKE   +  K+TA
Sbjct: 324 EEADTRPLKKEPITQSNKRTA 344



 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 103 RLQPPKKEDCNRRRKK 150
           R  PP +++  RRR++
Sbjct: 397 RQTPPSRKESGRRRRR 412



 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 100 RRLQPPKKEDCNRRRKK 150
           R+  P +KE   RRR++
Sbjct: 397 RQTPPSRKESGRRRRRR 413


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +1

Query: 40  RSWKKEDCNRRRKKTATAEERRLQP-PKKEDCNRRRKK 150
           RS     C RR     ++ E   QP  K++D   ++KK
Sbjct: 40  RSESSGYCGRRPSTFGSSNEALPQPISKRKDKEHKKKK 77


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +1

Query: 40  RSWKKEDCNRRRKKTATAEERRLQP-PKKEDCNRRRKK 150
           RS     C RR     ++ E   QP  K++D   ++KK
Sbjct: 40  RSESSGYCGRRPSTFGSSNEALPQPISKRKDKEHKKKK 77


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 30 RAEFLQPGGS 1
          + EFL PGGS
Sbjct: 67 KCEFLNPGGS 76


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 8/42 (19%), Positives = 18/42 (42%)
 Frame = +1

Query: 25  GTRGRRSWKKEDCNRRRKKTATAEERRLQPPKKEDCNRRRKK 150
           G+R R   +   C+ R + +   +    +   +  C+R R +
Sbjct: 218 GSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259



 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  RKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           R+  +   E  L+   +E+  RRR++  I +ER
Sbjct: 16  RQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 34  GRRSWKKEDCNRRRKKTATAEER 102
           G RS  +E+  RRR++    +ER
Sbjct: 26  GLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 30  EGKKELEERRLQPPKKEDCNRRRKKTATAEER 125
           + + E  E  L+   +E+  RRR++    +ER
Sbjct: 17  QSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/35 (20%), Positives = 16/35 (45%)
 Frame = +3

Query: 24  RHEGKKELEERRLQPPKKEDCNRRRKKTATAEERR 128
           R+E  +  +    +   +  C+R R +    ++RR
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRR 267


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  RKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           R+  +   E  L+   +E+  RRR++  I +ER
Sbjct: 16  RQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 34  GRRSWKKEDCNRRRKKTATAEER 102
           G RS  +E+  RRR++    +ER
Sbjct: 26  GLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 30  EGKKELEERRLQPPKKEDCNRRRKKTATAEER 125
           + + E  E  L+   +E+  RRR++    +ER
Sbjct: 17  QSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/35 (20%), Positives = 16/35 (45%)
 Frame = +3

Query: 24  RHEGKKELEERRLQPPKKEDCNRRRKKTATAEERR 128
           R+E  +  +    +   +  C+R R +    ++RR
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRR 267


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  RKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           R+  +   E  L+   +E+  RRR++  I +ER
Sbjct: 16  RQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 34  GRRSWKKEDCNRRRKKTATAEER 102
           G RS  +E+  RRR++    +ER
Sbjct: 26  GLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 30  EGKKELEERRLQPPKKEDCNRRRKKTATAEER 125
           + + E  E  L+   +E+  RRR++    +ER
Sbjct: 17  QSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/35 (20%), Positives = 16/35 (45%)
 Frame = +3

Query: 24  RHEGKKELEERRLQPPKKEDCNRRRKKTATAEERR 128
           R+E  +  +    +   +  C+R R +    ++RR
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRR 267


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  RKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           R+  +   E  L+   +E+  RRR++  I +ER
Sbjct: 16  RQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 34  GRRSWKKEDCNRRRKKTATAEER 102
           G RS  +E+  RRR++    +ER
Sbjct: 26  GLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 30  EGKKELEERRLQPPKKEDCNRRRKKTATAEER 125
           + + E  E  L+   +E+  RRR++    +ER
Sbjct: 17  QSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/35 (20%), Positives = 16/35 (45%)
 Frame = +3

Query: 24  RHEGKKELEERRLQPPKKEDCNRRRKKTATAEERR 128
           R+E  +  +    +   +  C+R R +    ++RR
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRR 267


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  RKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           R+  +   E  L+   +E+  RRR++  I +ER
Sbjct: 16  RQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 34  GRRSWKKEDCNRRRKKTATAEER 102
           G RS  +E+  RRR++    +ER
Sbjct: 26  GLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 30  EGKKELEERRLQPPKKEDCNRRRKKTATAEER 125
           + + E  E  L+   +E+  RRR++    +ER
Sbjct: 17  QSRSEDSETGLRSRTQEERLRRRREWMIQQER 48


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  RKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           R+  +   E  L+   +E+  RRR++  I +ER
Sbjct: 16  RQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 34  GRRSWKKEDCNRRRKKTATAEER 102
           G RS  +E+  RRR++    +ER
Sbjct: 26  GLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 30  EGKKELEERRLQPPKKEDCNRRRKKTATAEER 125
           + + E  E  L+   +E+  RRR++    +ER
Sbjct: 17  QSRSEDSETGLRSRTQEERLRRRREWMIQQER 48


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  RKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           R+  +   E  L+   +E+  RRR++  I +ER
Sbjct: 16  RQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 34  GRRSWKKEDCNRRRKKTATAEER 102
           G RS  +E+  RRR++    +ER
Sbjct: 26  GLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 30  EGKKELEERRLQPPKKEDCNRRRKKTATAEER 125
           + + E  E  L+   +E+  RRR++    +ER
Sbjct: 17  QSRSEDSETGLRSRTQEERLRRRREWMIQQER 48


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  RKKTATAEERRLQPPKKEDCNRRRKKTAIAEER 148
           R+  +   E  L+   +E+  RRR++  I +ER
Sbjct: 16  RQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 34  GRRSWKKEDCNRRRKKTATAEER 102
           G RS  +E+  RRR++    +ER
Sbjct: 26  GLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 30  EGKKELEERRLQPPKKEDCNRRRKKTATAEER 125
           + + E  E  L+   +E+  RRR++    +ER
Sbjct: 17  QSRSEDSETGLRSRTQEERLRRRREWMIQQER 48



 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/35 (20%), Positives = 16/35 (45%)
 Frame = +3

Query: 24  RHEGKKELEERRLQPPKKEDCNRRRKKTATAEERR 128
           R+E  +  +    +   +  C+R R +    ++RR
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRR 267


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +1

Query: 61  CNRRRKKTATAEERRLQPP 117
           C        TAE R+ +PP
Sbjct: 435 CTHTTTNGCTAELRKKEPP 453


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +1

Query: 61  CNRRRKKTATAEERRLQPP 117
           C        TAE R+ +PP
Sbjct: 421 CTHTTTNGCTAELRKKEPP 439


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +1

Query: 61  CNRRRKKTATAEERRLQPP 117
           C        TAE R+ +PP
Sbjct: 455 CTHTTTNGCTAELRKKEPP 473


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +1

Query: 61  CNRRRKKTATAEERRLQPP 117
           C        TAE R+ +PP
Sbjct: 404 CTHTTTNGCTAELRKKEPP 422


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 14  CRNSARGEEGAGRKKTATAEER 79
           C +   G+E + R+ T   EE+
Sbjct: 410 CESQMMGDEMSLRELTQVTEEK 431


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = +1

Query: 1   GSPGLQEFGTRGRRSWKKED 60
           G  G       G +SW +ED
Sbjct: 396 GHSGQSSSHHHGSKSWTQED 415


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.131    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,929
Number of Sequences: 438
Number of extensions: 780
Number of successful extensions: 53
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 30
effective length of database: 133,203
effective search space used:  2530857
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.8 bits)

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