Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P23
         (214 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023EF12 Cluster: hypothetical protein FG10584.1; ...    31   3.9  
UniRef50_A5VA94 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_Q23C31 Cluster: Putative uncharacterized protein; n=4; ...    31   6.7  
UniRef50_A0FNS7 Cluster: Putative uncharacterized protein precur...    30   8.9  

>UniRef50_UPI000023EF12 Cluster: hypothetical protein FG10584.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG10584.1 - Gibberella zeae PH-1
          Length = 307

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -1

Query: 193 GTFWGYANVWRTVELLIRTTNTQPAALLHILN 98
           GT +GY ++    ELL+ TT   PAALL  LN
Sbjct: 76  GTVYGYQSLVSESELLVVTTLEDPAALLGALN 107


>UniRef50_A5VA94 Cluster: Putative uncharacterized protein; n=1;
           Sphingomonas wittichii RW1|Rep: Putative uncharacterized
           protein - Sphingomonas wittichii RW1
          Length = 414

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -1

Query: 208 ACDISGTFWGYANVWRTVELLIRTTNTQPAALLHILNLVPESISLKHCTHCL 53
           AC++SG FWGYA  +    L +     +PAAL     L        H  H L
Sbjct: 285 ACELSGDFWGYALPY---ALALAEAGDRPAALALAKRLAATYPEQAHVQHVL 333


>UniRef50_Q23C31 Cluster: Putative uncharacterized protein; n=4;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 886

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 126 NLLPCYTSLISYQNRYH*NTVHTVYHEVSCIFFTCESACSSC 1
           N L C + L  YQN+   +     Y   + I F C  +CS+C
Sbjct: 307 NCLKCVSPLYFYQNKCTSSIQQGTYCNENHICFACNQSCSTC 348


>UniRef50_A0FNS7 Cluster: Putative uncharacterized protein
           precursor; n=1; Burkholderia phymatum STM815|Rep:
           Putative uncharacterized protein precursor -
           Burkholderia phymatum STM815
          Length = 367

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 202 DISGTFWGYANVWRTVELLIR-TTNTQPAALLHILNLVPESISLKHCTHCLPR 47
           D S  FWG  N   T++  +R +TNT    L +++N  P + S    T   P+
Sbjct: 310 DFSNNFWGITNT-TTIQGRVRDSTNTSNPRLPNVINYAPPAASADPATPADPQ 361


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,817,668
Number of Sequences: 1657284
Number of extensions: 3789723
Number of successful extensions: 10416
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10415
length of database: 575,637,011
effective HSP length: 49
effective length of database: 494,430,095
effective search space used: 10383031995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)