Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P23
         (214 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   0.41 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    20   3.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   3.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    19   5.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    19   6.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   6.7  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   8.9  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    19   8.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   8.9  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 0.41
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 185 LGICKRVENCRTADKDNEHPTCCLVTHP 102
           LG+ +  E     D   EHPTC L   P
Sbjct: 163 LGLHRANEPVVLDDSKEEHPTCALDLTP 190


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 109 HILNLVPESISLKHCT 62
           H   ++PE   L HCT
Sbjct: 303 HEFQILPERGELGHCT 318


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -1

Query: 178  YANVWRTVELLIRTTNT-QPAALLHILN-LVPESISLKHCT 62
            +AN+ +T++ LIR+ +T +  A     N L P+++ L   T
Sbjct: 885  FANLTQTLDKLIRSPDTLRKIAQNRGTNPLAPDAVDLTQLT 925


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 205 CDISGTFWGYANV 167
           CDI G  +GY +V
Sbjct: 234 CDICGKSFGYNHV 246


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 213 WVPVI*VEHFGDM 175
           WVP I V + GDM
Sbjct: 125 WVPDISVYNSGDM 137


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 9/37 (24%), Positives = 15/37 (40%)
 Frame = -1

Query: 184 WGYANVWRTVELLIRTTNTQPAALLHILNLVPESISL 74
           W + N+   ++         P  LLH+  L P   S+
Sbjct: 865 WKFPNLVEVLDEFPSVRPFAPLLLLHLTPLQPRFYSI 901


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 96  RLRMCNKAAGWVFVV 140
           R R+C   AG VF+V
Sbjct: 174 RHRLCVFVAGVVFIV 188


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 164 ENCRTADKDNE 132
           ++ + ADKDNE
Sbjct: 459 QHIKNADKDNE 469


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 205 CDISGTFWGYANVWRTVEL 149
           C+I G     A VW TV L
Sbjct: 879 CEIGGLQHPGAVVWFTVSL 897


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,161
Number of Sequences: 438
Number of extensions: 1275
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3165825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)