Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P18
(388 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 23 1.1
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 23 1.4
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 23 1.4
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 23 1.4
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 22 2.4
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 21 4.3
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 21 4.3
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 21 4.3
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 21 5.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 5.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 5.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 5.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 5.6
AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory recept... 20 9.8
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 23.0 bits (47), Expect = 1.1
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 94 TLH--NFLNNITYYRFIRFSQVPFIINLNCHLV 2
TLH N+++++ ++RF + PF+I+ N LV
Sbjct: 212 TLHFVNYIDDLFFFRFEKSKFEPFLIS-NISLV 243
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 22.6 bits (46), Expect = 1.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 94 TLHNFLNNITYYRFIRFSQVPFIINLNCHL 5
TL L T Y + + +IN+NC L
Sbjct: 146 TLSALLEGFTLYHTTAYLHIITMINMNCAL 175
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 22.6 bits (46), Expect = 1.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 94 TLHNFLNNITYYRFIRFSQVPFIINLNCHL 5
TL L T Y + + +IN+NC L
Sbjct: 146 TLSALLEGFTLYHTTAYLHIITMINMNCAL 175
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 22.6 bits (46), Expect = 1.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 94 TLHNFLNNITYYRFIRFSQVPFIINLNCHL 5
TL L T Y + + +IN+NC L
Sbjct: 146 TLSALLEGFTLYHTTAYLHIITMINMNCAL 175
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 21.8 bits (44), Expect = 2.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 386 IVLPSTSILLVANSTPIVDLDSKLNSFLVK 297
+ L STSILL+ N+ + + ++ + L+K
Sbjct: 84 VTLTSTSILLIVNA--VFVKEKRIRTLLIK 111
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.0 bits (42), Expect = 4.3
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3
Query: 194 NLFNRRQNRSNIKRQEKFYQTKIKGDTNITGSVNTAQFPK*HYLLQIYKIFTGSVY 27
N F+ +N + + K GD++ TG+ T Q + L++ K F + Y
Sbjct: 152 NNFSAEENSVSEPPANFYPWMKAHGDSSATGNKRTRQTYTRYQTLELEKEFHFNKY 207
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.0 bits (42), Expect = 4.3
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3
Query: 194 NLFNRRQNRSNIKRQEKFYQTKIKGDTNITGSVNTAQFPK*HYLLQIYKIFTGSVY 27
N F+ +N + + K GD++ TG+ T Q + L++ K F + Y
Sbjct: 152 NNFSAEENSVSEPPANFYPWMKAHGDSSATGNKRTRQTYTRYQTLELEKEFHFNKY 207
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 21.0 bits (42), Expect = 4.3
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3
Query: 194 NLFNRRQNRSNIKRQEKFYQTKIKGDTNITGSVNTAQFPK*HYLLQIYKIFTGSVY 27
N F+ +N + + K GD++ TG+ T Q + L++ K F + Y
Sbjct: 152 NNFSAEENSVSEPPANFYPWMKAHGDSSATGNKRTRQTYTRYQTLELEKEFHFNKY 207
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 20.6 bits (41), Expect = 5.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 123 LYFCLIKFLLTFYI*PILTSI 185
LYFC I L I PIL ++
Sbjct: 333 LYFCRIMVYLNSAINPILYNL 353
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 378 TVHLYTPCCE 349
T+H++TP CE
Sbjct: 478 TLHIWTPKCE 487
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 378 TVHLYTPCCE 349
T+H++TP CE
Sbjct: 478 TLHIWTPKCE 487
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 378 TVHLYTPCCE 349
T+H++TP CE
Sbjct: 478 TLHIWTPKCE 487
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 378 TVHLYTPCCE 349
T+H++TP CE
Sbjct: 478 TLHIWTPKCE 487
>AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory receptor
candidate 28 protein.
Length = 248
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 75 FRKLCSVY*ACDICVSLYFCLIKFLL 152
FR + +VY V FC++KF L
Sbjct: 66 FRFVYAVYNIFGAFVMGLFCILKFAL 91
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,321
Number of Sequences: 336
Number of extensions: 1436
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8119573
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -