Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P18
(388 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0414 - 20548577-20549006,20553521-20553744 106 5e-24
05_06_0082 - 25425050-25425479,25426551-25426783 105 9e-24
09_02_0464 - 9591139-9591571,9592601-9592818 103 4e-23
05_07_0127 - 27872803-27873238,27873842-27874059 102 9e-23
01_06_0712 + 31397167-31397402,31399823-31400252 102 9e-23
05_01_0036 + 253734-253904,255216-255707 101 2e-22
01_06_1343 - 36461476-36461961,36463355-36463519 100 5e-22
05_03_0286 - 11623575-11624063,11625098-11625262 97 4e-21
01_06_0186 + 27294973-27295211,27295610-27296045 95 2e-20
03_06_0637 - 35219212-35219754,35220405-35220587 92 1e-19
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 92 2e-19
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 82 2e-16
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 81 3e-16
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 79 9e-16
06_03_1387 - 29820358-29821035 79 9e-16
10_06_0181 - 11532765-11533203,11536867-11537036 78 2e-15
09_06_0029 + 20336634-20336881,20337737-20338208 78 3e-15
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 71 3e-13
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 71 4e-13
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 68 2e-12
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 68 2e-12
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 68 3e-12
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 60 8e-10
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 58 2e-09
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 56 1e-08
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 52 1e-07
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 51 4e-07
05_05_0118 - 22504483-22504566,22504650-22504742,22504852-225049... 50 5e-07
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 49 1e-06
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 49 1e-06
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 47 6e-06
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403... 47 6e-06
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 46 1e-05
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 46 1e-05
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 43 7e-05
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 42 2e-04
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 39 0.002
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 39 0.002
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 39 0.002
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 35 0.026
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 35 0.026
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 35 0.026
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 34 0.034
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 33 0.079
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 32 0.18
10_01_0198 - 2158139-2158334,2158517-2158641,2158736-2158789,215... 31 0.32
05_06_0217 + 26457847-26457902,26458336-26458435,26458551-264586... 31 0.32
05_06_0080 + 25420371-25420423,25420681-25420780,25421742-254218... 30 0.56
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 30 0.56
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 29 0.97
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 28 3.0
10_01_0049 - 668482-669283,669596-670131,670235-670452,670554-67... 28 3.0
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 28 3.0
09_06_0370 - 22610441-22610569,22610659-22611060,22611141-226111... 27 3.9
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 27 3.9
07_03_0638 + 20196216-20196650,20196810-20196930,20197072-201971... 27 5.2
03_06_0408 - 33722741-33722893,33723174-33723350,33723798-337239... 27 5.2
01_06_0603 + 30530486-30530984,30531174-30531202,30531484-305316... 27 5.2
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 27 5.2
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 27 6.9
05_04_0184 - 18855062-18855604,18855889-18856611 27 6.9
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 27 6.9
01_06_1314 + 36215607-36215734,36215911-36216043,36216135-362162... 27 6.9
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 26 9.1
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 26 9.1
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 106 bits (255), Expect = 5e-24
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1
Query: 220 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
ED+YDYLFKVVLIGDSGVGKS+LLSRFTRNEFSLES+STIGVEFATRS++VDGK +
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 105 bits (253), Expect = 9e-24
Identities = 49/56 (87%), Positives = 55/56 (98%)
Frame = +1
Query: 220 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
ED+YDYLFKVVLIGDSGVGKS+LLSRFT+NEFSLES+STIGVEFATRS++VDGK I
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVI 66
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 103 bits (248), Expect = 4e-23
Identities = 49/56 (87%), Positives = 53/56 (94%)
Frame = +1
Query: 220 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
ED+YDYLFKVVLIGDSGVGKS+LLSRFTRNEFSLES+STIGVEFATRSI VD K +
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 102 bits (245), Expect = 9e-23
Identities = 48/56 (85%), Positives = 53/56 (94%)
Frame = +1
Query: 220 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
+D+YDYLFKVVLIGDSGVGKS+LLSRFTRNEFSLES+STIGVEFATRSI VD K +
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 102 bits (245), Expect = 9e-23
Identities = 47/56 (83%), Positives = 53/56 (94%)
Frame = +1
Query: 220 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
ED+YDYLFK VLIGDSGVGKS+LLSRFT+NEF LES+STIGVEFATRSI+VDGK +
Sbjct: 12 EDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVV 67
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 101 bits (243), Expect = 2e-22
Identities = 50/61 (81%), Positives = 56/61 (91%), Gaps = 2/61 (3%)
Frame = +1
Query: 211 GTR--EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKT 384
GTR E+EYDYLFKVVLIGDSGVGKS+LLSRFTRNEF LES+STIGVEFATR++ V+GK
Sbjct: 3 GTRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKI 62
Query: 385 I 387
I
Sbjct: 63 I 63
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 100 bits (239), Expect = 5e-22
Identities = 44/56 (78%), Positives = 55/56 (98%)
Frame = +1
Query: 220 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
++EYDYLFK+VLIGDSGVGKS++LSRFTRNEF LES+STIGVEFATR+++++GKTI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTI 61
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 97.1 bits (231), Expect = 4e-21
Identities = 46/61 (75%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
Frame = +1
Query: 208 MGTRED-EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKT 384
MG R D EY YLFK+VLIGDSGVGKS++LSRFTRN FSL+S+STIGVEFAT+S++++GKT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 385 I 387
I
Sbjct: 61 I 61
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/56 (76%), Positives = 52/56 (92%)
Frame = +1
Query: 220 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
E+EYDYLFKVVLIGDSGVGKS+LLSRF R+EFSLE+RSTIGVEFAT+++ VD + +
Sbjct: 13 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLV 68
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 92.3 bits (219), Expect = 1e-19
Identities = 42/49 (85%), Positives = 48/49 (97%)
Frame = +1
Query: 223 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIE 369
DEYDYLFK+VLIGDSGVGKS+LLSRFTRN FSL+S+STIGVEFATR+I+
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQ 61
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 91.9 bits (218), Expect = 2e-19
Identities = 40/51 (78%), Positives = 50/51 (98%)
Frame = +1
Query: 220 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEV 372
++EYDYLFK+VLIGDSGVGKS++LSRFTRNEF LES+STIGVEFATR++++
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 81.8 bits (193), Expect = 2e-16
Identities = 35/52 (67%), Positives = 46/52 (88%)
Frame = +1
Query: 232 DYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
DY+FKVVLIGDS VGKS LL+RF RNEF+L+S++TIGVEF TR++ +D +T+
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 81.0 bits (191), Expect = 3e-16
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +1
Query: 211 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
G E DYLFK+VL+GDS VGKS+LL+RF RNEF S+STIGVEF T+ + +DGK I
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEI 63
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 79.4 bits (187), Expect = 9e-16
Identities = 34/52 (65%), Positives = 47/52 (90%)
Frame = +1
Query: 232 DYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
+YLFKVV+IGDS VGKS+LLSR+ RNEF+L S++TIGVEF T+S++++GK +
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDV 62
>06_03_1387 - 29820358-29821035
Length = 225
Score = 79.4 bits (187), Expect = 9e-16
Identities = 33/55 (60%), Positives = 47/55 (85%)
Frame = +1
Query: 223 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
+E DY+FKVV+IGDS VGK+ LL RFT++EF ++S+STIG+EF TR++E+ GK +
Sbjct: 2 EEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRV 56
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 78.2 bits (184), Expect = 2e-15
Identities = 34/53 (64%), Positives = 46/53 (86%)
Frame = +1
Query: 223 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGK 381
++ DY+FKVVLIGDS VGKS +L+RF RNEFS++S++TIGVEF TR++ +D K
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK 57
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 77.8 bits (183), Expect = 3e-15
Identities = 34/59 (57%), Positives = 47/59 (79%)
Frame = +1
Query: 211 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
G +E E DY+FKVV++GDS VGK+ LL RFT++EF L+S+STIGVEF TR++ + K +
Sbjct: 13 GEKEGEIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRV 71
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 70.9 bits (166), Expect = 3e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 226 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++E DGKTI
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTI 57
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 70.5 bits (165), Expect = 4e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 226 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++E DGKTI
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTI 57
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 68.1 bits (159), Expect = 2e-12
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = +1
Query: 226 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
+YDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R+IE+DGK I
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 68.1 bits (159), Expect = 2e-12
Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +1
Query: 202 LKMGTREDE--YDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVD 375
L G ED +DYLFK++LIGDSGVGKS LL RF + + STIGV+F R++E D
Sbjct: 10 LTFGIWEDNVLFDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQD 69
Query: 376 GKTI 387
GKTI
Sbjct: 70 GKTI 73
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 67.7 bits (158), Expect = 3e-12
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +1
Query: 226 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
+YDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R++E+DGK I
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRI 64
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 59.7 bits (138), Expect = 8e-10
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +1
Query: 229 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K I
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPI 55
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 58.4 bits (135), Expect = 2e-09
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1
Query: 229 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I VD + +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPV 55
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 55.6 bits (128), Expect = 1e-08
Identities = 20/48 (41%), Positives = 38/48 (79%)
Frame = +1
Query: 238 LFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGK 381
L KV+++GDSGVGK+SL++++ +FS + ++TIG +F T+ +++D +
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDR 55
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 52.4 bits (120), Expect = 1e-07
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1
Query: 223 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
D D K+VL+GDSGVGKS ++ RF R +F S+ T+G F ++++ ++ TI
Sbjct: 26 DSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTI 80
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 50.8 bits (116), Expect = 4e-07
Identities = 26/51 (50%), Positives = 30/51 (58%)
Frame = +1
Query: 229 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGK 381
Y Y FK V IGD+GVGKS LL +FT F T GVE+ + VDGK
Sbjct: 5 YAYRFKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGK 55
>05_05_0118 -
22504483-22504566,22504650-22504742,22504852-22504914,
22505048-22505145,22505378-22505478,22505581-22505653,
22505872-22505910,22506946-22507018
Length = 207
Score = 50.4 bits (115), Expect = 5e-07
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 13/67 (19%)
Frame = +1
Query: 226 EYDYLFKVVLIGDSG-------------VGKSSLLSRFTRNEFSLESRSTIGVEFATRSI 366
+YDYL K++LIGDS VGKS LL RF+ F+ +TIG++F R+I
Sbjct: 11 DYDYLIKLLLIGDSVFYKLFLVLSSIQCVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI 70
Query: 367 EVDGKTI 387
E+DGK I
Sbjct: 71 ELDGKRI 77
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 49.2 bits (112), Expect = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +1
Query: 229 YDYLFKVVLIGDSGVGKSSLLSRF-TRNEFSLESRSTIGVEFATRSIEVDGKTI 387
YD FK++LIGDS VGKSSLL F + + E TIGV+F + + V+GK +
Sbjct: 9 YDCSFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKL 62
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 48.8 bits (111), Expect = 1e-06
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKT 384
K+VL+GDSGVGKS ++ RF R +F S+ T+G F ++++ ++ T
Sbjct: 46 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDST 92
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 46.8 bits (106), Expect = 6e-06
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
K+VL+GD G GKSSL+ RF + +F STIG F ++++ V+ +T+
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETV 60
>03_05_0601 +
26039326-26039367,26039958-26040035,26040136-26040303,
26040994-26041042,26041502-26041575,26041940-26041948
Length = 139
Score = 46.8 bits (106), Expect = 6e-06
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
K+VL+GD G GKSSL+ RF + +F STIG F ++++ V+ +T+
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETV 60
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 46.0 bits (104), Expect = 1e-05
Identities = 16/49 (32%), Positives = 37/49 (75%)
Frame = +1
Query: 241 FKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
+K+V +GD VGK+S+++RF ++F ++TIG++F ++++ ++ +T+
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV 58
>05_01_0037 -
256891-256998,257347-257502,257753-257824,258737-258784,
259071-259143,259237-259250
Length = 156
Score = 45.6 bits (103), Expect = 1e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +1
Query: 226 EYDYLFKVVLIGDSGVGKSSLLSRFTR 306
EYDYLFK++LIGDS VGKS LL RF +
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFAK 30
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 43.2 bits (97), Expect = 7e-05
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +1
Query: 241 FKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
FK+VL+GD VGK+SL+ R+ + FS + +T+ + T+ + V+G I
Sbjct: 15 FKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPI 63
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +1
Query: 241 FKVVLIGDSGVGKSSLLSRF----TRNEFSLESRSTIGVEFATRSIEVDGKTI 387
FK++LIGDSGVGKSSLL F + TIGV+F + + + GK +
Sbjct: 20 FKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKL 72
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 241 FKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVE 348
FK++L+GD G GK++ + R EF TIGVE
Sbjct: 442 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVE 477
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 241 FKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVE 348
FK+V++GD G GK++ + R EF + TIGVE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 241 FKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVE 348
FK+V++GD G GK++ + R EF + TIGVE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE 49
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 34.7 bits (76), Expect = 0.026
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG T+
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTV 54
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 34.7 bits (76), Expect = 0.026
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG T+
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTV 54
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 34.7 bits (76), Expect = 0.026
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG T+
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTV 54
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 34.3 bits (75), Expect = 0.034
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
K V +GD VGK+ +L +T N+F + T+ F+ ++ VDG T+
Sbjct: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSA-NVVVDGTTV 56
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 33.1 bits (72), Expect = 0.079
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
K V +GD VGK+ +L +T N+F + T+ F+ ++ VDG +
Sbjct: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVSVDGNIV 55
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 31.9 bits (69), Expect = 0.18
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
K V +GD VGK+ +L +T N+F + T+ F+ ++ VD T+
Sbjct: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVVVDSTTV 56
>10_01_0198 -
2158139-2158334,2158517-2158641,2158736-2158789,
2159038-2159342,2159677-2159860,2159908-2159999,
2161777-2161885
Length = 354
Score = 31.1 bits (67), Expect = 0.32
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVD 375
+V+++GDSGVGKSSL+ + TIG + I ++
Sbjct: 29 RVLVVGDSGVGKSSLVHLILKGSAIARPPQTIGCAVDVKYIFIE 72
>05_06_0217 +
26457847-26457902,26458336-26458435,26458551-26458697,
26459040-26459120,26459251-26459396,26459509-26459572
Length = 197
Score = 31.1 bits (67), Expect = 0.32
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 238 LFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
L KV+++GDSG + +FS + ++TIG +F T+ + ++ + +
Sbjct: 9 LLKVIVLGDSG---------YVNKKFSQQYKATIGADFVTKEVLIEDRLV 49
>05_06_0080 +
25420371-25420423,25420681-25420780,25421742-25421888,
25421959-25422039,25422147-25422296
Length = 176
Score = 30.3 bits (65), Expect = 0.56
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +1
Query: 238 LFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGK 381
L KV+++GDSG + +FS + ++TIG +F T+ ++ + +
Sbjct: 8 LLKVIILGDSG---------YVNKKFSNQYKATIGADFLTKEVQFEDR 46
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 30.3 bits (65), Expect = 0.56
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +1
Query: 241 FKVVLIGDSGVGKSSLLSRFTRNEF 315
+K+V +GD VGK+++++RF ++F
Sbjct: 11 YKLVFLGDQAVGKTAIITRFMYDKF 35
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 29.5 bits (63), Expect = 0.97
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 202 LKMGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGK 381
LK +R E V ++G VGKSSL++ R+ + ST GV + + +++D K
Sbjct: 256 LKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRV-VNVGSTPGVTRSMQEVQLDKK 314
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 247 VVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDG 378
+V+ G SGVGK +L+++ + S S A R E+DG
Sbjct: 177 IVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAPREKEIDG 220
>10_01_0049 -
668482-669283,669596-670131,670235-670452,670554-670653,
670706-670855
Length = 601
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 140 YQTKIKGDTNITGSVNTAQFPK*HYLLQIYKIFTGSVYY 24
Y TK++G +N+T + N A + YL I F Y+
Sbjct: 103 YLTKVQGQSNVTAASNIAAWQGNCYLTTILGAFLADSYW 141
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 27.9 bits (59), Expect = 3.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 250 VLIGDSGVGKSSLLSRFTRNE 312
V++G SGVGKSSL++ N+
Sbjct: 160 VIVGPSGVGKSSLINALRSNQ 180
>09_06_0370 -
22610441-22610569,22610659-22611060,22611141-22611191,
22611475-22611700,22612219-22612289,22612411-22612530,
22612618-22612812,22612995-22613059,22613306-22613396,
22613611-22613672,22613796-22613846,22614326-22614427,
22614876-22614939,22615104-22615247
Length = 590
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 229 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKT 384
++ L + ++G GKSS+L +F + + E A + V GKT
Sbjct: 36 WESLPTIAVVGGQSSGKSSVLESIVGRDFLPRGSALVRQEIADETDRVTGKT 87
>07_03_1486 +
26899479-26899549,26899861-26899989,26900649-26900834,
26901025-26901247,26901662-26901666,26901796-26901924,
26902697-26902894,26903138-26903356,26903461-26903699,
26903797-26903888,26904009-26904224,26904327-26904554,
26904631-26904722,26904806-26904899,26905475-26905567,
26905667-26906640,26906727-26906841,26907135-26908895
Length = 1687
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 311 SFLVKRERRLLFPTPESPIKTTLNK*SYSSSLVP 210
S LVKRE L FP P SP YS S P
Sbjct: 828 SLLVKREFGLSFPGPVSPTSGRQTTSLYSGSFSP 861
>07_03_0638 +
20196216-20196650,20196810-20196930,20197072-20197168,
20197284-20197323,20197648-20197731,20198966-20199130
Length = 313
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEFSLESRSTIGVEFATRSIEVDGKTI 387
KV L+GD +GK+S + ++ ++ G+ +++ V G I
Sbjct: 130 KVSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGARI 177
>03_06_0408 -
33722741-33722893,33723174-33723350,33723798-33723947,
33724085-33724145,33724338-33724558
Length = 253
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEF 315
+V +IGD G GKSSL++ F
Sbjct: 16 RVAVIGDHGTGKSSLVATIATGRF 39
>01_06_0603 +
30530486-30530984,30531174-30531202,30531484-30531660,
30533662-30533745,30534059-30534277
Length = 335
Score = 27.1 bits (57), Expect = 5.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 202 LKMGTREDEY--DYLFKVVLIGDSGVGKSSLLSRFTRNE 312
+K R D+ D L + L+G S VGKSSLL+ R +
Sbjct: 119 VKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRK 157
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNEF-SLESRS 333
K V +GD VGK+ +L +T N+F ++E R+
Sbjct: 12 KCVTVGDGAVGKTCMLICYTCNKFPTVECRA 42
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 259 GDSGVGKSSLLSRFTRNEFSLESRSTI 339
G SGVGKS L+ +F N S++T+
Sbjct: 455 GMSGVGKSFLIRQFFNNYMRQSSKNTV 481
>05_04_0184 - 18855062-18855604,18855889-18856611
Length = 421
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 329 LDSKLNSFLVKRERRLLFPTPESPIKTTLNK*SYS 225
L+S ++ K ++ TPE PIKTT+ + YS
Sbjct: 300 LESAAKEYIQKCKKAKGKKTPEIPIKTTIKEEGYS 334
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLL 291
+VV+IGD G GKSSL+
Sbjct: 17 RVVVIGDPGTGKSSLV 32
>01_06_1314 +
36215607-36215734,36215911-36216043,36216135-36216281,
36217172-36217348,36217469-36217717,36217917-36217964,
36218364-36218419,36218639-36218720,36219260-36219515,
36219563-36219629,36219688-36219724,36219918-36220030,
36220838-36220988,36221352-36221538,36221768-36221841
Length = 634
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLL 291
+VV+IGD G GKSSL+
Sbjct: 17 RVVVIGDPGTGKSSLV 32
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTRNE 312
+V +IG VGKSSLL+ ++++E
Sbjct: 307 QVAIIGRPNVGKSSLLNAWSKSE 329
>08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 244 KVVLIGDSGVGKSSLLSRFTR 306
+V L+G SG GKSS+L+ R
Sbjct: 1024 RVALVGPSGAGKSSVLALLLR 1044
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,402,876
Number of Sequences: 37544
Number of extensions: 135288
Number of successful extensions: 507
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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