Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P17
(220 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0E8N7 Cluster: CG9243-PB, isoform B; n=6; Endopterygot... 79 2e-14
UniRef50_UPI00015B5CDC Cluster: PREDICTED: similar to conserved ... 50 8e-06
UniRef50_Q5JGW1 Cluster: DNA replication licensing factor, MCM2/... 32 2.2
UniRef50_A2DMM8 Cluster: Clan MC, family M14, Zinc carboxypeptid... 32 2.9
UniRef50_Q8PZD0 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_A6LQ19 Cluster: Drug resistance transporter, EmrB/QacA ... 31 5.1
UniRef50_O66255 Cluster: ORF12; n=1; Aggregatibacter actinomycet... 31 6.7
UniRef50_Q85UH3 Cluster: NADH-ubiquinone oxidoreductase chain 3;... 31 6.7
UniRef50_Q9KLM6 Cluster: Helicase IV; n=27; Vibrionales|Rep: Hel... 30 8.8
UniRef50_A7S2F5 Cluster: Predicted protein; n=1; Nematostella ve... 30 8.8
UniRef50_Q4PET7 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
>UniRef50_Q0E8N7 Cluster: CG9243-PB, isoform B; n=6;
Endopterygota|Rep: CG9243-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 574
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +1
Query: 25 RSVWRIVFTNFINSLKPKQIRGNNMGKDYIGNVYYEIPADPRSGKRKATRWYDPAKGKDF 204
R V I+F NF SL+P+Q RG+ +G+DY GN YYEIPA+P GKRK +RW++PA + F
Sbjct: 431 RDVIGIIFKNFWKSLRPRQFRGDYIGEDYFGNKYYEIPANPSIGKRKPSRWFEPADKEAF 490
Query: 205 QE 210
+
Sbjct: 491 DQ 492
>UniRef50_UPI00015B5CDC Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 154
Score = 50.4 bits (115), Expect = 8e-06
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +1
Query: 25 RSVWRIVFTNFINSLKPKQIRGNNMGKDYIGNVYYEIPADPRSGKRKATRWYDPAKGKDF 204
R + RI+F F+ SL PK + +G+DY+G YYE+ S K R++ P + +F
Sbjct: 6 RGLLRIIFKEFLRSLTPKIPKHTCVGEDYMGTKYYEVERIKTSIHHKPNRYFVPKEKNNF 65
Query: 205 QEPVP 219
++ +P
Sbjct: 66 EQEIP 70
>UniRef50_Q5JGW1 Cluster: DNA replication licensing factor, MCM2/3/5
family; n=1; Thermococcus kodakarensis KOD1|Rep: DNA
replication licensing factor, MCM2/3/5 family -
Pyrococcus kodakaraensis (Thermococcus kodakaraensis)
Length = 810
Score = 32.3 bits (70), Expect = 2.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 19 EYRSVWRIVFTNFINSLKPKQIRGNNMGK 105
E R W + FTN + LKP+ +R ++GK
Sbjct: 228 EVRGEWSVHFTNLRDKLKPEDVRAEHVGK 256
>UniRef50_A2DMM8 Cluster: Clan MC, family M14, Zinc
carboxypeptidase-like metallopeptidase; n=2; Trichomonas
vaginalis G3|Rep: Clan MC, family M14, Zinc
carboxypeptidase-like metallopeptidase - Trichomonas
vaginalis G3
Length = 581
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 10 SSGEYRSVWRIVF--TNFINSLKPK---QIRGNNMGKDY-IGNVYYEIPADPRSGKRKAT 171
S+ +YR + +V+ N +N PK N+G+ Y IGN YEI P + T
Sbjct: 41 SASDYRKQYELVYDPVNPVNYNGPKFSGDFESGNLGQVYLIGNKSYEIHLLPDPNETNTT 100
Query: 172 RWY 180
+W+
Sbjct: 101 QWF 103
>UniRef50_Q8PZD0 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 550
Score = 31.9 bits (69), Expect = 2.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 4 RGSSGEYRSVWRIVFTNFINSLKPKQIRGNNMGKDYIGNVYY 129
+ SGE ++W+++ NS KP +I N K+++ N+++
Sbjct: 307 QSKSGENLALWQVLAYLLGNSSKPSEIFNTNEAKNFLKNIFH 348
>UniRef50_A6LQ19 Cluster: Drug resistance transporter, EmrB/QacA
subfamily precursor; n=1; Clostridium beijerinckii NCIMB
8052|Rep: Drug resistance transporter, EmrB/QacA
subfamily precursor - Clostridium beijerinckii NCIMB
8052
Length = 483
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -2
Query: 207 LKILTFCRIVPSSCLSFTRPRVSRYFIINIAYVVFSHIISPYL 79
L I TF + SS +S P + +YF +NIA+V + +I+ YL
Sbjct: 16 LAIGTFMSALDSSVVSIVIPVIQKYFNVNIAFVEW--VITAYL 56
>UniRef50_O66255 Cluster: ORF12; n=1; Aggregatibacter
actinomycetemcomitans|Rep: ORF12 - Actinobacillus
actinomycetemcomitans (Haemophilusactinomycetemcomitans)
Length = 632
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 165 LSFTRPRVSRYFIINIAYVVFSHIISPY 82
+S P VSRYF+IN+ ++ +H++ Y
Sbjct: 581 VSGDNPNVSRYFVINVVRLLKNHVLGNY 608
>UniRef50_Q85UH3 Cluster: NADH-ubiquinone oxidoreductase chain 3;
n=3; Ciona|Rep: NADH-ubiquinone oxidoreductase chain 3 -
Ciona savignyi (Pacific transparent sea squirt)
Length = 115
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 207 LKILTFCRIVPSSCLSFTRPRVSRYFIINIAYVVFSHIIS 88
L+IL F + S CLSF +S +FI + Y++ IIS
Sbjct: 68 LEILLFLPFMKSECLSFFSLYLSLFFIFMVTYLLSIWIIS 107
>UniRef50_Q9KLM6 Cluster: Helicase IV; n=27; Vibrionales|Rep:
Helicase IV - Vibrio cholerae
Length = 699
Score = 30.3 bits (65), Expect = 8.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 40 IVFTNFINSLKPKQIRGNNMGKDYIGNVYYEI 135
++ NF++ L P Q+ N + +I N YY++
Sbjct: 1 MIADNFVSGLLPMQLNANKTAQFFIANEYYQV 32
>UniRef50_A7S2F5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 410
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 61 NSLKPKQIRGNNMGKDYIGNV-YYEIPADPRSGKRKATRWYDPAKGKDFQE 210
NS +P + RG + D G+ YY P +P +++ TR DP+ + F++
Sbjct: 154 NSNEPHRWRGEHGRDDTRGSRGYYSDPREPPRDRQRTTRSPDPSPSRYFEQ 204
>UniRef50_Q4PET7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 672
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 115 GNVYYEIPADPRSGKRKATRWYDPAKGK 198
G + Y P P SG+ W DPA+GK
Sbjct: 53 GTIRYRGPVPPASGEWLGIEWDDPARGK 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.316 0.137 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,889,545
Number of Sequences: 1657284
Number of extensions: 4231201
Number of successful extensions: 10398
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10395
length of database: 575,637,011
effective HSP length: 51
effective length of database: 491,115,527
effective search space used: 10313426067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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