Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P17
         (220 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   1.7  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    22   2.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           22   3.0  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    21   5.2  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = -3

Query: 179 YHRVAFLLPDLGSAGIS**TLPM*SFPILFPLICFGFREFIKFVKTIRHTLLYSPL 12
           Y R++ L+P+  S G     L   S  I+  L+  G+REF+K V+ I ++  Y  L
Sbjct: 344 YRRLSDLMPEFTSVG----RLQDDSSNII-QLVDEGYREFVKRVEFIDNSPDYMQL 394


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 98  ILFPLICFGFREFIKFVKTIRHTLL--YSPLDP 6
           I+F ++ F +  F+ F+K I +T    Y P  P
Sbjct: 573 IIFLVLLFAYMVFMMFMKWIAYTAKTDYQPRTP 605


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +1

Query: 88  GNNMGKDYIGNVYYEIPADPRSGKRKATRWYDPA 189
           G  +G D  G+ YY   ADP  G    T    PA
Sbjct: 329 GGLLGTD--GSQYYTSAADPSMGNDPQTGMGGPA 360


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 198 LTFCRIVPSSCLSFTRPRVSRYFIINIA 115
           LT       SCLSF    V+RY +  +A
Sbjct: 175 LTSSECCSKSCLSFAYKCVNRYDLSVVA 202


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.137    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,030
Number of Sequences: 2352
Number of extensions: 4489
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 50
effective length of database: 446,379
effective search space used:  9820338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)