Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P16
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 285 1e-77
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 285 1e-77
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 284 1e-77
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 284 1e-77
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 284 1e-77
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 284 1e-77
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 284 1e-77
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 284 1e-77
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 284 1e-77
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 279 4e-76
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 243 4e-65
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 177 3e-45
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 138 1e-33
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 135 1e-32
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 135 1e-32
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 135 1e-32
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 129 6e-31
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 115 1e-26
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 91 2e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 42 2e-04
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 36 0.008
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.18
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 29 1.3
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 29 1.3
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 29 1.3
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 2.9
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 28 2.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 5.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 27 5.1
AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical ... 27 5.1
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 6.8
Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical p... 26 9.0
Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical p... 26 9.0
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 26 9.0
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 26 9.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 26 9.0
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 26 9.0
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 26 9.0
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 26 9.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 285 bits (698), Expect = 1e-77
Identities = 132/133 (99%), Positives = 133/133 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 365 ASGRTTGIVLDSG 403
ASGRTTGIVLDSG
Sbjct: 145 ASGRTTGIVLDSG 157
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 285 bits (698), Expect = 1e-77
Identities = 132/133 (99%), Positives = 133/133 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 365 ASGRTTGIVLDSG 403
ASGRTTGIVLDSG
Sbjct: 145 ASGRTTGIVLDSG 157
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 284 bits (697), Expect = 1e-77
Identities = 131/133 (98%), Positives = 133/133 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 365 ASGRTTGIVLDSG 403
ASGRTTG+VLDSG
Sbjct: 145 ASGRTTGVVLDSG 157
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 284 bits (697), Expect = 1e-77
Identities = 131/133 (98%), Positives = 133/133 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 365 ASGRTTGIVLDSG 403
ASGRTTG+VLDSG
Sbjct: 145 ASGRTTGVVLDSG 157
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 284 bits (697), Expect = 1e-77
Identities = 131/133 (98%), Positives = 133/133 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 365 ASGRTTGIVLDSG 403
ASGRTTG+VLDSG
Sbjct: 145 ASGRTTGVVLDSG 157
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 284 bits (697), Expect = 1e-77
Identities = 131/133 (98%), Positives = 133/133 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 365 ASGRTTGIVLDSG 403
ASGRTTG+VLDSG
Sbjct: 145 ASGRTTGVVLDSG 157
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 284 bits (697), Expect = 1e-77
Identities = 131/133 (98%), Positives = 133/133 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 365 ASGRTTGIVLDSG 403
ASGRTTG+VLDSG
Sbjct: 145 ASGRTTGVVLDSG 157
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 284 bits (697), Expect = 1e-77
Identities = 131/133 (98%), Positives = 133/133 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 11 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 70
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 71 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 130
Query: 365 ASGRTTGIVLDSG 403
ASGRTTG+VLDSG
Sbjct: 131 ASGRTTGVVLDSG 143
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 284 bits (697), Expect = 1e-77
Identities = 131/133 (98%), Positives = 133/133 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 365 ASGRTTGIVLDSG 403
ASGRTTG+VLDSG
Sbjct: 145 ASGRTTGVVLDSG 157
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 279 bits (685), Expect = 4e-76
Identities = 128/133 (96%), Positives = 132/133 (99%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 24 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 83
Query: 185 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
KIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFNTPAMYV IQAVLSLY
Sbjct: 84 KIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLY 143
Query: 365 ASGRTTGIVLDSG 403
ASGRTTGIVLD+G
Sbjct: 144 ASGRTTGIVLDTG 156
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 243 bits (594), Expect = 4e-65
Identities = 112/113 (99%), Positives = 113/113 (100%)
Frame = +2
Query: 65 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 244
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 245 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 403
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSG
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 113
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 177 bits (430), Expect = 3e-45
Identities = 77/134 (57%), Positives = 103/134 (76%), Gaps = 1/134 (0%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
E P+ F + VGRP++ VM G D ++G +A+S RG+ +++YP+EHGIV NW DME
Sbjct: 27 EQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDME 86
Query: 185 KIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 361
KIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSL
Sbjct: 87 KIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSL 146
Query: 362 YASGRTTGIVLDSG 403
YA+GRTTG+VLDSG
Sbjct: 147 YATGRTTGVVLDSG 160
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 138 bits (334), Expect = 1e-33
Identities = 69/133 (51%), Positives = 92/133 (69%), Gaps = 3/133 (2%)
Frame = +2
Query: 14 PRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 187
P +FPS+VGRP + VG + KD VG+E R +L + YP+++GIV NWDDM
Sbjct: 28 PAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAH 87
Query: 188 IWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 364
+W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+LY
Sbjct: 88 VWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLY 147
Query: 365 ASGRTTGIVLDSG 403
A G TG+V+DSG
Sbjct: 148 AQGLLTGVVVDSG 160
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 135 bits (326), Expect = 1e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KI 190
KI
Sbjct: 85 KI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 135 bits (326), Expect = 1e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KI 190
KI
Sbjct: 85 KI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 135 bits (326), Expect = 1e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 184
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 185 KI 190
KI
Sbjct: 85 KI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 129 bits (312), Expect = 6e-31
Identities = 58/59 (98%), Positives = 59/59 (100%)
Frame = +2
Query: 5 EDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 181
+DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 115 bits (276), Expect = 1e-26
Identities = 59/123 (47%), Positives = 76/123 (61%), Gaps = 9/123 (7%)
Frame = +2
Query: 62 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 238
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 239 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVL 394
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 395 DSG 403
DSG
Sbjct: 176 DSG 178
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 91.5 bits (217), Expect = 2e-19
Identities = 40/86 (46%), Positives = 59/86 (68%)
Frame = +2
Query: 146 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 325
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 326 AMYVAIQAVLSLYASGRTTGIVLDSG 403
A Y++ VLS +A GRT G+++DSG
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 41.9 bits (94), Expect = 2e-04
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Frame = +2
Query: 8 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 187
++PR V SIV + +H+ V + + +E K + ++ PIE G V NWD ++
Sbjct: 23 ESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYVR-PIERGYVVNWDTQQQ 76
Query: 188 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 367
IW TF + V + LT+ A + ++I+F+ F ++ + L
Sbjct: 77 IWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKH 135
Query: 368 SGRTT----GIVLDSG 403
S + +V+DSG
Sbjct: 136 SNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 41.9 bits (94), Expect = 2e-04
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Frame = +2
Query: 8 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 187
++PR V SIV + +H+ V + + +E K + ++ PIE G V NWD ++
Sbjct: 23 ESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYVR-PIERGYVVNWDTQQQ 76
Query: 188 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 367
IW TF + V + LT+ A + ++I+F+ F ++ + L
Sbjct: 77 IWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKH 135
Query: 368 SGRTT----GIVLDSG 403
S + +V+DSG
Sbjct: 136 SNKINNEKCAVVVDSG 151
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 36.3 bits (80), Expect = 0.008
Identities = 34/130 (26%), Positives = 52/130 (40%)
Frame = +2
Query: 14 PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 193
P++ FP+I R + VG + R I +E + D+ K
Sbjct: 202 PQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPISATDPSVERYSIDK--DVLKAV 259
Query: 194 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 373
EL+V P ++ VLL+ P ++ QI E + + Q L LYA
Sbjct: 260 IGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYD 319
Query: 374 RTTGIVLDSG 403
TTG+V+D G
Sbjct: 320 VTTGVVVDIG 329
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 32.7 bits (71), Expect = 0.10
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 10 RSPRRVPLDRRTTSSPGRHGRHGSEGLLRR**GTEQERYPHTQIPHRTRHRHQL 171
+S R P T +PG HG GS L ++Q++ H +PH +++ L
Sbjct: 359 QSERSTPGQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNL 412
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 32.7 bits (71), Expect = 0.10
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 10 RSPRRVPLDRRTTSSPGRHGRHGSEGLLRR**GTEQERYPHTQIPHRTRHRHQL 171
+S R P T +PG HG GS L ++Q++ H +PH +++ L
Sbjct: 359 QSERSTPGQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNL 412
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.18
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +3
Query: 213 SCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPP--CT*LSRPCSHCTRPVVPP 383
+C PR + SC P +P P P C PS P C P + C P PP
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 231 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 377
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 231 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 377
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 231 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 377
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 231 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 377
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 228 PRSTQSCSPKLPSTPKPTE 284
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 228 PRSTQSCSPKLPSTPKPTE 284
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 228 PRSTQSCSPKLPSTPKPTE 284
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 228 PRSTQSCSPKLPSTPKPTE 284
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 27.9 bits (59), Expect = 2.9
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 46 TSSPGRHGRHGSEG 87
+ +PGRHGRHG+ G
Sbjct: 111 SGTPGRHGRHGAPG 124
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 402 PESSTIPVVRPDAYSESTAWIATYMAGVL 316
P SST+PVV P ++ T +Y+A L
Sbjct: 868 PLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 140 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 241
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 140 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 241
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 234 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPP 383
ST + P+ P + R L SR T P C +R + TR VPP
Sbjct: 327 STTGAARTRPAIPAVSAPR--ALTSRAPTGPACPTTTRSAAPATRTAVPP 374
>AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical
protein H23L24.4 protein.
Length = 368
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -1
Query: 363 YSESTAWIATYMAGVLKVSNIICVIFSLLA 274
Y S+ TY+ +L++S+II ++FS+++
Sbjct: 52 YKRSSTCTRTYIFVILRLSSIILLVFSIIS 81
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 6.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 41 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 205
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 167 NWDDMEKIWHHTFYNE--LRVAPEEHPV 244
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 6.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 41 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 205
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 188 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 322
I ++T N L ++ + + E NP N +KM I+ E F T
Sbjct: 135 ILNNTKLNNLNISSLSNSNNIVEIKNNPNLNLQKMCSIIHEVFFT 179
>Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 188 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 322
I ++T N L ++ + + E NP N +KM I+ E F T
Sbjct: 135 ILNNTKLNNLNISSLSNSNNIVEIKNNPNLNLQKMCSIIHEVFFT 179
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 372 PDAYSESTAWIATYMAGVLKVSNIICVIFSLL 277
P S TAWI GV + N + IFS+L
Sbjct: 286 PYGLSIGTAWIFLLAPGVYNILNQLASIFSML 317
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 112 EQERYPHTQIPHRTRHRHQLGRYGEDLASHLLQ 210
+Q++ H Q+P R RH GRY + + LQ
Sbjct: 712 QQQQQHHHQMPMDQRKRHSSGRYDALMGAMPLQ 744
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 55 PGRHGRHGS 81
PGRHGRHGS
Sbjct: 363 PGRHGRHGS 371
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 134 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 286
L Y + + N DM+ N +R A EE + + + P PK++R+
Sbjct: 130 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 134 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 286
L Y + + N DM+ N +R A EE + + + P PK++R+
Sbjct: 130 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 134 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 286
L Y + + N DM+ N +R A EE + + + P PK++R+
Sbjct: 169 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,329,998
Number of Sequences: 27780
Number of extensions: 234388
Number of successful extensions: 921
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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