Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P16
         (405 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.3  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   2.3  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   4.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   9.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   9.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 215  LRVAPEEHPVLLTEAPLNPKANREKM 292
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 217 QLIVEGVMPDLLHIV 173
           Q +V+ V PD+LH++
Sbjct: 23  QTVVDKVPPDMLHLI 37


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 46  TSSPGRHGRHGSEGL 90
           T+  G HG HG  GL
Sbjct: 129 TNQTGLHGLHGLHGL 143



 Score = 20.6 bits (41), Expect = 7.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 19  RRVPLDRRTTSSPGRHGRHGSEGL 90
           RR+      T   G HG HG  GL
Sbjct: 123 RRLEQLTNQTGLHGLHGLHGLHGL 146


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 325 GCVEGLEHNLCHLLSVG 275
           G +EG++  L H L +G
Sbjct: 49  GDIEGIKEKLDHFLEMG 65


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 325 GCVEGLEHNLCHLLSVG 275
           G +EG++  L H L +G
Sbjct: 49  GDIEGIKEKLDHFLEMG 65


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 292 DTDYVRDLQHTRHVR 336
           D  Y R +Q  RH+R
Sbjct: 3   DCPYARCIQERRHIR 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,993
Number of Sequences: 438
Number of extensions: 2706
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)