Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P14
(320 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 2.4
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 2.4
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 21 3.2
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 21 3.2
EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine vasopre... 21 4.2
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 20 5.5
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 20 7.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 7.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 7.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 7.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 7.3
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.4 bits (43), Expect = 2.4
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +3
Query: 117 CRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 218
C+A +I K N CR C + ++G K
Sbjct: 74 CKAKDEGSCIIDKTHRNQCRACRLKKCQNVGMNK 107
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.4 bits (43), Expect = 2.4
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +3
Query: 117 CRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 218
C+A +I K N CR C + ++G K
Sbjct: 74 CKAKDEGSCIIDKTHRNQCRACRLKKCQNVGMNK 107
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.0 bits (42), Expect = 3.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 293 IYLVLIEMKQFFAYIKNLLNLSLV 222
+YL+L K+F YI ++ LS++
Sbjct: 107 LYLILRPGKRFDEYIYGIIFLSIL 130
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.0 bits (42), Expect = 3.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 293 IYLVLIEMKQFFAYIKNLLNLSLV 222
+YL+L K+F YI ++ LS++
Sbjct: 107 LYLILRPGKRFDEYIYGIIFLSIL 130
>EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine
vasopressin-like peptide protein.
Length = 146
Score = 20.6 bits (41), Expect = 4.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 139 CLFEQARHEREPC 101
C E HEREPC
Sbjct: 78 CQREGFFHEREPC 90
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 20.2 bits (40), Expect = 5.5
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 185 PRVCA*YWI*KAGLS 229
P+ CA Y++ ++GLS
Sbjct: 569 PKNCAAYYVCRSGLS 583
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 19.8 bits (39), Expect = 7.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 120 RACSNRHGLIRKYGLNIC 173
R C+ HGL+ LNIC
Sbjct: 473 RKCN--HGLVYDLELNIC 488
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 7.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -1
Query: 299 GFIYLVLIEMKQFFAYIKNLLNLSLV 222
G IYL+ I + +++NL++V
Sbjct: 1032 GIIYLLSIPSMYLLLILYSIINLNVV 1057
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 7.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -1
Query: 299 GFIYLVLIEMKQFFAYIKNLLNLSLV 222
G IYL+ I + +++NL++V
Sbjct: 1032 GIIYLLSIPSMYLLLILYSIINLNVV 1057
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 19.8 bits (39), Expect = 7.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -1
Query: 299 GFIYLVLIEMKQFFAYIKNLLNLSLV 222
G IYL+ I + +++NL++V
Sbjct: 1032 GIIYLLSIPSMYLLLILYSIINLNVV 1057
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 19.8 bits (39), Expect = 7.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -1
Query: 299 GFIYLVLIEMKQFFAYIKNLLNLSLV 222
G IYL+ I + +++NL++V
Sbjct: 1032 GIIYLLSIPSMYLLLILYSIINLNVV 1057
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,951
Number of Sequences: 336
Number of extensions: 1674
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 6048897
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -