Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P14
(320 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29 pro... 109 2e-24
L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens (c... 109 2e-24
BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29 p... 109 2e-24
BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29 p... 109 2e-24
AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29 p... 109 2e-24
AB007165-1|BAA25827.1| 26|Homo sapiens ribosomal protein S29 p... 54 1e-07
CR457364-1|CAG33645.1| 599|Homo sapiens FLJ23231 protein. 31 1.0
BC005001-1|AAH05001.1| 599|Homo sapiens zinc finger CCCH-type c... 31 1.0
AY920403-1|AAX14017.1| 599|Homo sapiens MCP-1 treatment-induced... 31 1.0
AL449284-1|CAH73689.1| 599|Homo sapiens zinc finger CCCH-type c... 31 1.0
AL034379-6|CAI20551.1| 599|Homo sapiens zinc finger CCCH-type c... 31 1.0
AK026884-1|BAB15581.1| 599|Homo sapiens protein ( Homo sapiens ... 31 1.0
Z83841-1|CAI42594.1| 686|Homo sapiens zinc finger CCCH-type con... 29 2.4
AL050306-1|CAI42834.1| 686|Homo sapiens zinc finger CCCH-type c... 29 2.4
X72498-1|CAA51163.1| 115|Homo sapiens mature inhibin protein. 29 4.1
X57579-1|CAA40806.1| 297|Homo sapiens protein ( H.sapiens activ... 29 4.1
X57578-1|CAA40805.1| 426|Homo sapiens activin beta-A subunit pr... 29 4.1
X04447-1|CAA28041.1| 116|Homo sapiens protein ( Human inhibin B... 29 4.1
M13436-1|AAA59168.1| 426|Homo sapiens INHBA protein. 29 4.1
J03634-1|AAA35787.1| 426|Homo sapiens protein ( Human erythroid... 29 4.1
BC007858-1|AAH07858.1| 426|Homo sapiens inhibin, beta A (activi... 29 4.1
AF218018-1|AAG17260.1| 426|Homo sapiens unknown protein. 29 4.1
AC005027-1|AAQ96861.1| 426|Homo sapiens unknown protein. 29 4.1
X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 28 5.4
X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag... 28 5.4
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 28 5.4
AB051513-1|BAB21817.1| 624|Homo sapiens KIAA1726 protein protein. 28 5.4
L05628-1|AAB46616.1| 1531|Homo sapiens multidrug resistance-asso... 28 7.2
EF419769-1|ABN79590.1| 1531|Homo sapiens ATP-binding cassette, s... 28 7.2
AF022853-5|AAB83982.1| 1400|Homo sapiens multidrug resistance pr... 28 7.2
AF022853-4|AAB83981.1| 1456|Homo sapiens multidrug resistance pr... 28 7.2
AF022853-3|AAB83980.1| 1459|Homo sapiens multidrug resistance pr... 28 7.2
AF022853-2|AAB83983.1| 1450|Homo sapiens multidrug resistance pr... 28 7.2
AF022853-1|AAB83979.1| 1515|Homo sapiens multidrug resistance pr... 28 7.2
AB209120-1|BAD92357.1| 1439|Homo sapiens ATP-binding cassette, s... 28 7.2
>U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 109 bits (262), Expect = 2e-24
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +3
Query: 57 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 224
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens
(clone cori-1cl5) S29 ribosomal protein mRNA, complete
cds. ).
Length = 56
Score = 109 bits (262), Expect = 2e-24
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +3
Query: 57 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 224
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 109 bits (262), Expect = 2e-24
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +3
Query: 57 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 224
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 109 bits (262), Expect = 2e-24
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +3
Query: 57 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 224
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 109 bits (262), Expect = 2e-24
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +3
Query: 57 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 224
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>AB007165-1|BAA25827.1| 26|Homo sapiens ribosomal protein S29
protein.
Length = 26
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 141 GLIRKYGLNICRQCFREYAHDIGFKK 218
GLIRKYGLN+CRQCFR+YA DIGF K
Sbjct: 1 GLIRKYGLNMCRQCFRQYAKDIGFIK 26
>CR457364-1|CAG33645.1| 599|Homo sapiens FLJ23231 protein.
Length = 599
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 157 YLRMRPCLFEQARHEREPCPYLRGCEYQI 71
+LR +P E H ++PCPY R C Y I
Sbjct: 291 FLRKKPLTLE---HRKQPCPYGRKCTYGI 316
>BC005001-1|AAH05001.1| 599|Homo sapiens zinc finger CCCH-type
containing 12A protein.
Length = 599
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 157 YLRMRPCLFEQARHEREPCPYLRGCEYQI 71
+LR +P E H ++PCPY R C Y I
Sbjct: 291 FLRKKPLTLE---HRKQPCPYGRKCTYGI 316
>AY920403-1|AAX14017.1| 599|Homo sapiens MCP-1 treatment-induced
protein protein.
Length = 599
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 157 YLRMRPCLFEQARHEREPCPYLRGCEYQI 71
+LR +P E H ++PCPY R C Y I
Sbjct: 291 FLRKKPLTLE---HRKQPCPYGRKCTYGI 316
>AL449284-1|CAH73689.1| 599|Homo sapiens zinc finger CCCH-type
containing 12A protein.
Length = 599
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 157 YLRMRPCLFEQARHEREPCPYLRGCEYQI 71
+LR +P E H ++PCPY R C Y I
Sbjct: 291 FLRKKPLTLE---HRKQPCPYGRKCTYGI 316
>AL034379-6|CAI20551.1| 599|Homo sapiens zinc finger CCCH-type
containing 12A protein.
Length = 599
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 157 YLRMRPCLFEQARHEREPCPYLRGCEYQI 71
+LR +P E H ++PCPY R C Y I
Sbjct: 291 FLRKKPLTLE---HRKQPCPYGRKCTYGI 316
>AK026884-1|BAB15581.1| 599|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23231 fis, clone CAE10247. ).
Length = 599
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 157 YLRMRPCLFEQARHEREPCPYLRGCEYQI 71
+LR +P E H ++PCPY R C Y I
Sbjct: 291 FLRKKPLTLE---HRKQPCPYGRKCTYGI 316
>Z83841-1|CAI42594.1| 686|Homo sapiens zinc finger CCCH-type
containing 12B protein.
Length = 686
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 157 YLRMRPCLFEQARHEREPCPYLRGCEY 77
+LR RP + E H+++PCPY + C Y
Sbjct: 196 FLRKRPIVPE---HKKQPCPYGKKCTY 219
>AL050306-1|CAI42834.1| 686|Homo sapiens zinc finger CCCH-type
containing 12B protein.
Length = 686
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 157 YLRMRPCLFEQARHEREPCPYLRGCEY 77
+LR RP + E H+++PCPY + C Y
Sbjct: 196 FLRKRPIVPE---HKKQPCPYGKKCTY 219
>X72498-1|CAA51163.1| 115|Homo sapiens mature inhibin protein.
Length = 115
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 22 FWVSRKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQTDMVSF 150
F+VS K + W+ SG H + G P H +SF
Sbjct: 16 FFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSF 58
>X57579-1|CAA40806.1| 297|Homo sapiens protein ( H.sapiens activin
beta-A subunit (exon 2). ).
Length = 297
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 22 FWVSRKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQTDMVSF 150
F+VS K + W+ SG H + G P H +SF
Sbjct: 197 FFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSF 239
>X57578-1|CAA40805.1| 426|Homo sapiens activin beta-A subunit
protein.
Length = 426
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 22 FWVSRKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQTDMVSF 150
F+VS K + W+ SG H + G P H +SF
Sbjct: 326 FFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSF 368
>X04447-1|CAA28041.1| 116|Homo sapiens protein ( Human inhibin B
gene 3'-region macrophage cell line U937 (ATCC CRL
1539). ).
Length = 116
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 22 FWVSRKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQTDMVSF 150
F+VS K + W+ SG H + G P H +SF
Sbjct: 16 FFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSF 58
>M13436-1|AAA59168.1| 426|Homo sapiens INHBA protein.
Length = 426
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 22 FWVSRKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQTDMVSF 150
F+VS K + W+ SG H + G P H +SF
Sbjct: 326 FFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSF 368
>J03634-1|AAA35787.1| 426|Homo sapiens protein ( Human erythroid
differentiation protein mRNA (EDF), complete cds. ).
Length = 426
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 22 FWVSRKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQTDMVSF 150
F+VS K + W+ SG H + G P H +SF
Sbjct: 326 FFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSF 368
>BC007858-1|AAH07858.1| 426|Homo sapiens inhibin, beta A (activin
A, activin AB alpha polypeptide) protein.
Length = 426
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 22 FWVSRKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQTDMVSF 150
F+VS K + W+ SG H + G P H +SF
Sbjct: 326 FFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSF 368
>AF218018-1|AAG17260.1| 426|Homo sapiens unknown protein.
Length = 426
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 22 FWVSRKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQTDMVSF 150
F+VS K + W+ SG H + G P H +SF
Sbjct: 326 FFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSF 368
>AC005027-1|AAQ96861.1| 426|Homo sapiens unknown protein.
Length = 426
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 22 FWVSRKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQTDMVSF 150
F+VS K + W+ SG H + G P H +SF
Sbjct: 326 FFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSF 368
>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
pre-pro-von Willebrand factor. ).
Length = 2813
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 214 LNPISCAYSRKHCLQIFKPYLRMRPCLFEQARHEREPCPYLRGCEYQI 71
LNP +S + C + P FE P PYLR C Y +
Sbjct: 572 LNPRMTRFSEEACAVLTSP-------TFEACHRAVSPLPYLRNCRYDV 612
>X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA
fragment (5'terminus) for von Willebrand factor (vWF).
).
Length = 1400
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 214 LNPISCAYSRKHCLQIFKPYLRMRPCLFEQARHEREPCPYLRGCEYQI 71
LNP +S + C + P FE P PYLR C Y +
Sbjct: 572 LNPRMTRFSEEACAVLTSP-------TFEACHRAVSPLPYLRNCRYDV 612
>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor
protein.
Length = 2813
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 214 LNPISCAYSRKHCLQIFKPYLRMRPCLFEQARHEREPCPYLRGCEYQI 71
LNP +S + C + P FE P PYLR C Y +
Sbjct: 572 LNPRMTRFSEEACAVLTSP-------TFEACHRAVSPLPYLRNCRYDV 612
>AB051513-1|BAB21817.1| 624|Homo sapiens KIAA1726 protein protein.
Length = 624
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 157 YLRMRPCLFEQARHEREPCPYLRGCEY 77
+LR +P + E H+++PCPY + C Y
Sbjct: 142 FLRKKPIVPE---HKKQPCPYGKKCTY 165
>L05628-1|AAB46616.1| 1531|Homo sapiens multidrug
resistance-associated protein protein.
Length = 1531
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 312 FFFSRVHLFGSHRNETILRLH*KFIKS*LSPAF*IQYHAHTLGSTACRYSSHIYE*DHVC 133
FFF +H IL+L KF+ +P + ++ L TAC + +++ H+C
Sbjct: 329 FFFKAIHDLMMFSGPQILKLLIKFVNDTKAPDWQGYFYTVLLFVTACLQTLVLHQYFHIC 388
>EF419769-1|ABN79590.1| 1531|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 1 protein.
Length = 1531
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 312 FFFSRVHLFGSHRNETILRLH*KFIKS*LSPAF*IQYHAHTLGSTACRYSSHIYE*DHVC 133
FFF +H IL+L KF+ +P + ++ L TAC + +++ H+C
Sbjct: 329 FFFKAIHDLMMFSGPQILKLLIKFVNDTKAPDWQGYFYTVLLFVTACLQTLVLHQYFHIC 388
>AF022853-5|AAB83982.1| 1400|Homo sapiens multidrug resistance
protein protein.
Length = 1400
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 312 FFFSRVHLFGSHRNETILRLH*KFIKS*LSPAF*IQYHAHTLGSTACRYSSHIYE*DHVC 133
FFF +H IL+L KF+ +P + ++ L TAC + +++ H+C
Sbjct: 313 FFFKAIHDLMMFSGPQILKLLIKFVNDTKAPDWQGYFYTVLLFVTACLQTLVLHQYFHIC 372
>AF022853-4|AAB83981.1| 1456|Homo sapiens multidrug resistance
protein protein.
Length = 1456
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 312 FFFSRVHLFGSHRNETILRLH*KFIKS*LSPAF*IQYHAHTLGSTACRYSSHIYE*DHVC 133
FFF +H IL+L KF+ +P + ++ L TAC + +++ H+C
Sbjct: 313 FFFKAIHDLMMFSGPQILKLLIKFVNDTKAPDWQGYFYTVLLFVTACLQTLVLHQYFHIC 372
>AF022853-3|AAB83980.1| 1459|Homo sapiens multidrug resistance
protein protein.
Length = 1459
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 312 FFFSRVHLFGSHRNETILRLH*KFIKS*LSPAF*IQYHAHTLGSTACRYSSHIYE*DHVC 133
FFF +H IL+L KF+ +P + ++ L TAC + +++ H+C
Sbjct: 313 FFFKAIHDLMMFSGPQILKLLIKFVNDTKAPDWQGYFYTVLLFVTACLQTLVLHQYFHIC 372
>AF022853-2|AAB83983.1| 1450|Homo sapiens multidrug resistance
protein protein.
Length = 1450
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 312 FFFSRVHLFGSHRNETILRLH*KFIKS*LSPAF*IQYHAHTLGSTACRYSSHIYE*DHVC 133
FFF +H IL+L KF+ +P + ++ L TAC + +++ H+C
Sbjct: 313 FFFKAIHDLMMFSGPQILKLLIKFVNDTKAPDWQGYFYTVLLFVTACLQTLVLHQYFHIC 372
>AF022853-1|AAB83979.1| 1515|Homo sapiens multidrug resistance
protein protein.
Length = 1515
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 312 FFFSRVHLFGSHRNETILRLH*KFIKS*LSPAF*IQYHAHTLGSTACRYSSHIYE*DHVC 133
FFF +H IL+L KF+ +P + ++ L TAC + +++ H+C
Sbjct: 313 FFFKAIHDLMMFSGPQILKLLIKFVNDTKAPDWQGYFYTVLLFVTACLQTLVLHQYFHIC 372
>AB209120-1|BAD92357.1| 1439|Homo sapiens ATP-binding cassette,
sub-family C, member 1 isoform 1 variant protein.
Length = 1439
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 312 FFFSRVHLFGSHRNETILRLH*KFIKS*LSPAF*IQYHAHTLGSTACRYSSHIYE*DHVC 133
FFF +H IL+L KF+ +P + ++ L TAC + +++ H+C
Sbjct: 227 FFFKAIHDLMMFSGPQILKLLIKFVNDTKAPDWQGYFYTVLLFVTACLQTLVLHQYFHIC 286
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,718,203
Number of Sequences: 237096
Number of extensions: 1001575
Number of successful extensions: 5708
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5707
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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