Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P12
(365 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 42 2e-04
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 40 4e-04
AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical... 37 0.004
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 37 0.005
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 35 0.016
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 33 0.063
AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical ... 33 0.063
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 31 0.33
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 31 0.33
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 29 0.77
AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine re... 28 2.4
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 27 3.1
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 27 3.1
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z81038-7|CAB02764.1| 453|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 26 7.2
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 26 7.2
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 26 7.2
AF039569-1|AAB99999.1| 451|Caenorhabditis elegans aryl hydrocar... 26 7.2
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 26 9.5
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 26 9.5
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 245 PWQVAL-YETKITDSKFMCGGTLVTHRHIITAAHC 346
PW V + + + D + +CGGTL+T +H++TAAHC
Sbjct: 44 PWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHC 78
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 209 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHC 346
VV G +T+ G +PW AL K T + CG +++ H+ITAAHC
Sbjct: 27 VVGGFETVPGAFPWTAAL-RNKATKAHH-CGASILDKTHLITAAHC 70
>AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical
protein F25E5.10 protein.
Length = 401
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 209 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIIT 334
V+ GT G+ PW VALY D GTLV++RHII+
Sbjct: 50 VLNGTIANAGETPWTVALYIPDHLDHSVYTTGTLVSNRHIIS 91
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 200 SPLVVLGTKTLEGQWPWQVALY-ETKITDSKFMCGGTLVTHRHIITAAHC 346
S V G + + PW V Y +K S C GT+V+ RHI+ A HC
Sbjct: 160 SAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC 209
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 35.1 bits (77), Expect = 0.016
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 218 GTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHC 346
G+++ WPW V L CGG+L+ ++TAAHC
Sbjct: 61 GSESSPHSWPWTVQLLSRL---GHHRCGGSLIDPNFVLTAAHC 100
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 33.1 bits (72), Expect = 0.063
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 179 CGRVINESPLVVLGTKTLEGQWPWQVALY---ETKITDSKFM--CGGTLVTHRHIITAAH 343
CG+ N + G K + PW V + K D + C GTL + RHI+TA H
Sbjct: 33 CGK--NVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATH 90
Query: 344 C 346
C
Sbjct: 91 C 91
>AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical
protein F25E5.4 protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.063
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 170 EMQCGRVINESPLVVLGTKTLEGQWPWQVALYETKITDSK---FMCGGTLVTHRHIIT 334
+++CG + + G G PW V++Y T SK F+ GTL++ RH++T
Sbjct: 29 QLKCG-IKGSQREFINGDTARPGDHPWAVSVYVKANTTSKNGVFLGPGTLISARHVLT 85
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 30.7 bits (66), Expect = 0.33
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +2
Query: 209 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTH 355
V+LGT W W V + T + GT+ + + + HC H
Sbjct: 270 VLLGTVAQMDHWIWSVTVRPNSQTVAMGCVDGTIACYNLVFSTVHCVDH 318
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 30.7 bits (66), Expect = 0.33
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +2
Query: 209 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTH 355
V+LGT W W V + T + GT+ + + + HC H
Sbjct: 270 VLLGTVAQMDHWIWSVTVRPNSQTVAMGCVDGTIACYNLVFSTVHCVDH 318
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 29.5 bits (63), Expect = 0.77
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +2
Query: 212 VLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHC 346
++G +++ W L +CG T++ ++TAAHC
Sbjct: 38 IIGGNSIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC 82
>AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine
receptor, class r protein6 protein.
Length = 410
Score = 27.9 bits (59), Expect = 2.4
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = -3
Query: 240 CPSRVFVPSTTKGLSLITLPHCISDPLTVIVGVDALDXXXXXXXXXXXXXXXXXXVQFCV 61
CPS + +PST + LS + + P I+ + LD + V
Sbjct: 15 CPSIIEIPSTKEPLS----ENALLGPFRKIIKITGLDCSLIARAEFNPSLRIKSILTRIV 70
Query: 60 ILVCGRLVFSSMSVKSKA 7
LV +VF M++ SKA
Sbjct: 71 ALVVVAIVFFRMAIYSKA 88
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 288 LLSVILVS*RATCQGHCPSRVFVPSTTKGLSLITLPHCISDPLTVIV 148
L+ ++LVS +CQ C + KG SL ++P + DP T ++
Sbjct: 6 LILLVLVSGVISCQSGCKCPTKTTAVCKGSSLRSIP-ILLDPRTTVL 51
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 288 LLSVILVS*RATCQGHCPSRVFVPSTTKGLSLITLPHCISDPLTVIV 148
L+ ++LVS +CQ C + KG SL ++P + DP T ++
Sbjct: 6 LILLVLVSGVISCQSGCKCPTKTTAVCKGSSLRSIP-ILLDPRTTVL 51
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 27.1 bits (57), Expect = 4.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 293 MCGGTLVTHRHIITAAHC 346
+CGG L+ +IT+AHC
Sbjct: 45 VCGGVLIAPSIVITSAHC 62
>Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical
protein T02C12.2 protein.
Length = 418
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 230 LEGQWPWQVALYETKITDSKFMCGGTLVTHRHIIT 334
LEG Q +E D KF+ LV+H+H+I+
Sbjct: 86 LEGSSDVQTRRFEDMKGDRKFLERSPLVSHKHVIS 120
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 242 WPWQVALYETKITDSKFMCGGTLVTHRHIITAAH 343
+PW V+ D GG++++ HIITAAH
Sbjct: 28 FPWAVSF----TVDGVNRLGGSIISPYHIITAAH 57
>Z81038-7|CAB02764.1| 453|Caenorhabditis elegans Hypothetical
protein C25A1.11 protein.
Length = 453
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 114 RHQFNHQVHPHQQ*PLKDQRCNAEE*STKVL 206
+ N +HP Q ++DQ C +E KVL
Sbjct: 160 QRNLNELIHPDDQDKIRDQLCGSEVSVNKVL 190
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 45 DRRRVSRKTGHLRQHSRLNHVNRRHQFNHQVHPHQ 149
+RRR+ + HLRQ + N +Q +HQ PHQ
Sbjct: 99 ERRRLEHEK-HLRQQQQTQPYNLHYQQHHQ--PHQ 130
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 45 DRRRVSRKTGHLRQHSRLNHVNRRHQFNHQVHPHQ 149
+RRR+ + HLRQ + N +Q +HQ PHQ
Sbjct: 99 ERRRLEHEK-HLRQQQQTQPYNLHYQQHHQ--PHQ 130
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 45 DRRRVSRKTGHLRQHSRLNHVNRRHQFNHQVHPHQ 149
+RRR+ + HLRQ + N +Q +HQ PHQ
Sbjct: 99 ERRRLEHEK-HLRQQQQTQPYNLHYQQHHQ--PHQ 130
>AF039569-1|AAB99999.1| 451|Caenorhabditis elegans aryl hydrocarbon
receptor nucleartranslocator ortholog AHA-1 protein.
Length = 451
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 114 RHQFNHQVHPHQQ*PLKDQRCNAEE*STKVL 206
+ N +HP Q ++DQ C +E KVL
Sbjct: 160 QRNLNELIHPDDQDKIRDQLCGSEVSVNKVL 190
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 25.8 bits (54), Expect = 9.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 105 VNRRHQFNHQVHPHQQ 152
++ HQ HQ+H HQQ
Sbjct: 429 IHHHHQSQHQLHQHQQ 444
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 25.8 bits (54), Expect = 9.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 105 VNRRHQFNHQVHPHQQ 152
++ HQ HQ+H HQQ
Sbjct: 396 IHHHHQSQHQLHQHQQ 411
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 25.8 bits (54), Expect = 9.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 72 GHLRQHSRLNHVNRRHQFNHQVHPH 146
GH RQHS H+ + Q H H H
Sbjct: 43 GHRRQHSSPGHLQQFQQELHARHHH 67
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 25.8 bits (54), Expect = 9.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 72 GHLRQHSRLNHVNRRHQFNHQVHPH 146
GH RQHS H+ + Q H H H
Sbjct: 104 GHRRQHSSPGHLQQFQQELHARHHH 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,393,585
Number of Sequences: 27780
Number of extensions: 125744
Number of successful extensions: 357
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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