Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P12
         (365 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    37   6e-05
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   2.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   6.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.0  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 37.1 bits (82), Expect = 6e-05
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +2

Query: 209 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHS 364
           +V GT T   ++P    +  T   +   +CG T+++ R+++TAAHC   E++
Sbjct: 161 IVGGTNTGINEFPMMAGIKRTY--EPGMICGATIISKRYVLTAAHCIIDENT 210


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 87  HSRLNHVNRRHQFNHQVHPH 146
           +SR+ ++NR H F +   P+
Sbjct: 221 YSRVRNLNRTHGFPNDAQPY 240


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 295 HKLTICNFGFIES 257
           HK T+C+  FI+S
Sbjct: 176 HKCTVCSKTFIQS 188


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 69  FCVILVCGRLVFSSMSV 19
           FCV+L C       MSV
Sbjct: 153 FCVVLACSTATVYVMSV 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,682
Number of Sequences: 438
Number of extensions: 1640
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)