Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P11
         (293 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   1.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   1.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   7.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   9.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   9.6  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 142 VNNIRYKEWYANP 180
           VNNI+ K W++ P
Sbjct: 37  VNNIKRKRWWSRP 49


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 81  VSYPHDPCRSYLE 43
           +SY HDP   YLE
Sbjct: 372 ISYIHDPDHRYLE 384


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 248 FRTWDVPKLLAILDQ 204
           +R W  P L+ +LD+
Sbjct: 862 WRHWKFPNLVEVLDE 876


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 224  AWAHPKYG 247
            AWA+ KYG
Sbjct: 1024 AWAYSKYG 1031


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 218 AILDQNDLSDLL 183
           AILDQN   D++
Sbjct: 826 AILDQNKFKDII 837


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,585
Number of Sequences: 438
Number of extensions: 1511
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5994288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)