Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P10
(318 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 33 0.049
04_04_1377 - 33064906-33065607 31 0.15
01_03_0055 + 12074512-12076155 29 0.60
09_01_0039 - 687711-688607,692336-693113,693414-693501,693761-69... 28 1.4
08_02_0707 - 20212190-20214592 28 1.4
06_03_0094 + 16573075-16573268,16574636-16574996 28 1.4
09_01_0050 + 853712-855368,855440-856113 28 1.8
03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657 27 2.4
02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735 27 2.4
01_07_0326 - 42750189-42750965 27 2.4
05_05_0266 - 23694466-23696787,23696885-23697187 27 3.2
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026 27 4.2
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 27 4.2
12_02_1067 - 25792295-25793167 26 5.6
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 26 5.6
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 26 5.6
09_06_0278 + 21991016-21992120,21992341-21992702,21992766-219934... 26 5.6
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 26 5.6
05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877 26 5.6
04_04_0946 - 29579779-29580004,29580098-29580210 26 5.6
03_03_0196 + 15331604-15331646,15332141-15332260,15334106-153342... 26 5.6
02_02_0310 - 8842286-8843314 26 5.6
01_06_0044 - 25922298-25923434 26 5.6
01_01_1210 + 9749166-9749358,9750783-9751110,9752171-9752375 26 5.6
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 26 7.4
10_06_0019 - 9688395-9688867,9688905-9689070 25 9.7
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 25 9.7
08_01_0029 - 216526-216621,216706-216854,217489-217594,218650-21... 25 9.7
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 25 9.7
02_04_0613 + 24392238-24393550,24394585-24394687,24395153-24395257 25 9.7
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 25 9.7
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 33.1 bits (72), Expect = 0.049
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 87 RQHEHRIHSESRAHQHNHRRPRGDD 161
R+ + HS SR+H+H+H R GDD
Sbjct: 1225 RRSSKKDHSSSRSHRHHHHRSSGDD 1249
>04_04_1377 - 33064906-33065607
Length = 233
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 33 GDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDDEHAH 173
G RV + + G+ A E + H H H H +P G+++H H
Sbjct: 157 GSRVDALQTGMMVAPTT-HHRERQKHHHHHHHHHPHLQPHGEEQHHH 202
>01_03_0055 + 12074512-12076155
Length = 547
Score = 29.5 bits (63), Expect = 0.60
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 99 HRIHSESRAHQHNHRRPRGDD 161
HR+H H +H+R RGDD
Sbjct: 357 HRVHHHHHHHNGHHKRRRGDD 377
>09_01_0039 -
687711-688607,692336-693113,693414-693501,693761-694148,
694176-694401,694527-694680,695073-695145
Length = 867
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 142 DVHGVMMNMPIPFPLADRDACKDKGLTCPLQPNGAC*LYSHAASIKIISESKRGRE 309
D +++++P+ PL + K + QPN + L +A + S S+RG++
Sbjct: 56 DCFRILVDLPVAKPLKSKIGQKVNKVKATYQPNASRKLVFRSAGSAVSSSSRRGQK 111
>08_02_0707 - 20212190-20214592
Length = 800
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 93 HEHRIHSESRAHQHNHRRPRGDDEH 167
H H HS S +H H+H G ++H
Sbjct: 500 HSHS-HSHSHSHSHSHSHVHGHEDH 523
>06_03_0094 + 16573075-16573268,16574636-16574996
Length = 184
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 145 VHGVMMNMPIPFPLADRDACKDKGLTCPLQP 237
+HG ++++P P P A DA + TCP P
Sbjct: 18 LHGCLVSLPPPPPPALEDARNHRHTTCPRLP 48
>09_01_0050 + 853712-855368,855440-856113
Length = 776
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 296 LLSDMILILAAWLYS*QAPFGWSGQV 219
LL+D + LA W YS P W+G V
Sbjct: 39 LLADPLASLAGWGYSDDTPCAWNGVV 64
>03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657
Length = 413
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +1
Query: 190 DRDACKDKGLTCPLQPNGAC*LYSHAASIKIISESKRGRE 309
DRDA KD G P +G LY A +K E KR E
Sbjct: 119 DRDAAKDNGGDKPAPSDGDIVLYRRIAEVK-EKERKRALE 157
>02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735
Length = 738
Score = 27.5 bits (58), Expect = 2.4
Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 108 HSESRAHQHN-HRRPRGDDEHAH 173
H E + H H+ H +P G+++H H
Sbjct: 703 HREQQKHHHHPHLQPHGEEQHHH 725
>01_07_0326 - 42750189-42750965
Length = 258
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 138 GYAGELLIRSEFDVHADVTVSSQHALLSVLTAPGHHDSLHG 16
G G+LL+ SEF A V V Q+ + + A G + G
Sbjct: 218 GPIGDLLVSSEFSKMASVLVMQQYVITAAAAAGGARRAADG 258
>05_05_0266 - 23694466-23696787,23696885-23697187
Length = 874
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 138 GYAGELLIRSEFDVHADVTVSSQHALLSVLTAP 40
G G+LL+ SEF A V V Q+ + + L P
Sbjct: 795 GPIGDLLVSSEFSKMASVLVMQQYVITAPLPPP 827
>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
Length = 961
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 217 GLYPCKRLCQLEETVWACSSSPRGRLWL 134
GLY C+ + E ++W+ S GR WL
Sbjct: 161 GLYMCQEIMAHEGSIWSIKFSTNGR-WL 187
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 66 RAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDDEHAHTVXXXXQRR 200
RA ++ + HR H + H+H H GD H H QRR
Sbjct: 525 RARRRHQKGRHHRHHHD---HRHRHGHSHGDHHH-HYHGGHHQRR 565
>12_02_1067 - 25792295-25793167
Length = 290
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -2
Query: 233 WSGQVRPLSLQASLSARGNGMGMFIITPWTSVVMLVSS*FGV 108
W R SL +L RG G PW+ + ++ +GV
Sbjct: 46 WRAAARDASLWRALDLRGGGGAAARFMPWSPLAAAFAARYGV 87
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 242 PFGWSGQVRPLSLQASLSARGNGM 171
P GW GQ RP ++ A + GM
Sbjct: 277 PPGWQGQARPGAMSAGMQLMPGGM 300
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 26.2 bits (55), Expect = 5.6
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +3
Query: 36 DRVQSRR*GVRAAKKQ*RQH--EHRIHSESRAHQHNHRRPRGDDEHAHTVXXXXQRR 200
DR + RR R K + R EHR SE R H H R R DD +RR
Sbjct: 84 DRDRDRRDRDRGDKDRDRDRHREHRDRSERREH---HDRERSDDRDRRRGHDSERRR 137
>09_06_0278 +
21991016-21992120,21992341-21992702,21992766-21993459,
21994064-21994191
Length = 762
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +1
Query: 163 NMPIPFPLADRDAC--KDKGLTCPLQPN 240
N+ +PFP RD C + GLTC N
Sbjct: 42 NVSVPFPFGIRDGCSLEGFGLTCNTTSN 69
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 144 VCGYAGELLIRSE--FDVHADVTVSSQHALLS 55
+C YAGE+L +S+ D + D V+ LLS
Sbjct: 1088 ICHYAGEVLYQSDQFLDKNKDYVVAEHQELLS 1119
>05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877
Length = 446
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 270 GSVAV*LASTVWLEW--AGKAF 211
GS+A LA T+WL W A K F
Sbjct: 155 GSLAASLAGTIWLRWVAASKVF 176
>04_04_0946 - 29579779-29580004,29580098-29580210
Length = 112
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 36 DRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRRPR 152
DR + RR AA + EHR H H H +PR
Sbjct: 56 DRAKHRRKKRAAAHAVSVRKEHRNHHHHHRHHHQQPQPR 94
>03_03_0196 +
15331604-15331646,15332141-15332260,15334106-15334221,
15334661-15334749,15334885-15334927,15335567-15335741,
15335840-15335971,15336046-15336383,15336791-15337129,
15337293-15337975,15338228-15338807,15339356-15339679,
15340149-15340262
Length = 1031
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 270 GSVAV*LASTVWLEWAGKAFILASVSVS*RKRYGHVHHHPVDVCG 136
G + LA+ + +WA + ++A V+V+ R +G H CG
Sbjct: 648 GQGIIHLAAALGFDWAIRPILVAGVNVNFRDAHGWTALHWAASCG 692
>02_02_0310 - 8842286-8843314
Length = 342
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +3
Query: 93 HEHRIHSESRAHQHNHRRPRGDDEH 167
H R H H H+H +DEH
Sbjct: 182 HGRRSHHHHHRHHHHHHDENEEDEH 206
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 63 VRAAKKQ*RQHEHRIHSESRAHQHNHR 143
V AA+++ R+H R+H H+HR
Sbjct: 166 VAAAEEEDEDEMARLHHGRRSHHHHHR 192
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 6 RVSHRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDDE 164
R H H D + R G K+ HE SE R + +H + DDE
Sbjct: 224 RRRHHHHHHEDDHEQREEGA-PMKRFRHHHEEEEESEMRTKRFHHHHHKDDDE 275
>01_06_0044 - 25922298-25923434
Length = 378
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 216 PYLPTPAKRCLLTIQPRCQY*NH 284
PYLP ++R L+ ++ RC+ H
Sbjct: 123 PYLPLSSRRSLIVLRRRCRVIGH 145
>01_01_1210 + 9749166-9749358,9750783-9751110,9752171-9752375
Length = 241
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -1
Query: 252 LASTVWLEWAGKAFILASVSVS*RKRYGHVHHHPVDVCGYAGELLI 115
LAS + + G +L ++ + +GH H+HP++ AG +L+
Sbjct: 99 LASLLLIVLGGSYILLFALG---KGGHGHAHNHPMEKMAVAGLVLV 141
>12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 217 GLYPCKRLCQLEETVWACSSSPRGRLWL 134
GLY C+ + E ++W+ S GR WL
Sbjct: 1121 GLYMCQEIMAHEGSIWSIKFSTDGR-WL 1147
>10_06_0019 - 9688395-9688867,9688905-9689070
Length = 212
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 108 EFDVHADVTVSSQHALLSVLTAPGHHDSLHG 16
EF +H DV V + A + ++ D LHG
Sbjct: 143 EFAIHCDVAVVEEAAAAATMSTELGPDDLHG 173
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 75 KKQ*RQHEHRIHSESRAHQHNHRRPRGDDEHA 170
KK+ R+H+ R H +S++ +H H D E +
Sbjct: 187 KKEKRKHKKRHHHKSKSKRH-HSSENSDSEES 217
>08_01_0029 -
216526-216621,216706-216854,217489-217594,218650-218841
Length = 180
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 170 GMFIITPWTSVVMLVSS*FGVNSMFMLTLLFLR 72
G+FI W+ ++L++ VN++ L LL +R
Sbjct: 130 GLFISVVWSGPLLLITILILVNTLVTLCLLMVR 162
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +3
Query: 75 KKQ*RQHEHRIHSESRAHQHNHRRPR 152
+ Q H H H R H H+ R+ R
Sbjct: 133 QSQRHHHRHHHHQRQRHHHHHQRQQR 158
>02_04_0613 + 24392238-24393550,24394585-24394687,24395153-24395257
Length = 506
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 79 NSNVSMNIEFTPNQELTSITTDVHGVMMNMPIPFPLADRDACKDK 213
+SN+ + +F+ + + +TT VHG +N+ + R DK
Sbjct: 163 DSNLQIQDDFSRDMVGSHVTTKVHGYCVNLDLDITFHLRPGKDDK 207
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Frame = +3
Query: 3 TRVSHRAD---CHGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRRPR---GDDE 164
+R HR++ H V + + + R H HR S H+H + R DD
Sbjct: 739 SRKKHRSEDSRAHTSDVHKHKLKRHSKDLEPRHHRHRDSSSEDEHEHRSSKSRHRHRDDY 798
Query: 165 HAH 173
H H
Sbjct: 799 HYH 801
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,570,859
Number of Sequences: 37544
Number of extensions: 192255
Number of successful extensions: 624
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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