Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P10
(318 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-10|AAB71040.2| 154|Caenorhabditis elegans He1 homologu... 36 0.005
Z81513-7|CAB04179.1| 319|Caenorhabditis elegans Hypothetical pr... 29 0.55
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 29 0.96
U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusi... 28 1.3
U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusi... 28 1.3
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 27 2.9
AF077534-7|AAK71376.1| 319|Caenorhabditis elegans Prion-like-(q... 27 2.9
Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical pr... 26 5.1
AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kin... 26 5.1
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 26 6.8
U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical pr... 26 6.8
U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical pr... 26 6.8
U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 26 6.8
U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 26 6.8
U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 26 6.8
U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 26 6.8
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 26 6.8
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 26 6.8
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 26 6.8
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 25 8.9
>AF025467-10|AAB71040.2| 154|Caenorhabditis elegans He1 homologue
protein 1 protein.
Length = 154
Score = 36.3 bits (80), Expect = 0.005
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 16 TVQTVMVTGCSQDAKE----CVLRRNSNVSMNIEFTPNQELTSITTDVHG-VMMNMPIPF 180
TV V GC K+ C+ ++ S + I F P+++ + T V V + + F
Sbjct: 30 TVSQVKADGCELTVKDGKKVCLFKKGSRPIIQIAFKPSKDTDKLKTSVRAKVGGSAMVDF 89
Query: 181 PLADRDACKDKGLTCPL 231
P + DAC G+ CP+
Sbjct: 90 PQTNSDAC-TYGVKCPV 105
>Z81513-7|CAB04179.1| 319|Caenorhabditis elegans Hypothetical
protein F26D2.9 protein.
Length = 319
Score = 29.5 bits (63), Expect = 0.55
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -2
Query: 239 FGWSGQVRPLSLQASLSARGNGMGMFIITPWT-SVVMLVSS*FGVNSMFMLTLLFLRSTH 63
FG G + L++ R + + +F+I T +V + + F + M+ LLFL +
Sbjct: 52 FGLFGSIFHLTVLTQKPIRNSSVTIFLIGIATCDLVRMFETIFSLGKMYYKQLLFLHISQ 111
Query: 62 SLAS*LHPVTMTVCTVAN 9
+ L + MT+ V N
Sbjct: 112 TCVPPLSYIDMTIFVVLN 129
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.7 bits (61), Expect = 0.96
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 18 RADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQ-HNHRRPRGDD-EH 167
+A+ R +SR A +K+ + H H SR H+ H HR RG+ EH
Sbjct: 255 KAEMKRKRSRSRSTDRGADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREH 306
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +3
Query: 87 RQHEHRIHSESRAHQHNHRRPRGDDEH 167
R H HR H H+ R DD H
Sbjct: 292 RDHRHRDHRGEHREHREHKEHRRDDRH 318
>U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform b protein.
Length = 561
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 93 HEHRIHSESRAHQHNHRRPRGDDEHAHT 176
H H H S H HN+++ + +D H H+
Sbjct: 246 HGHS-HGGSHGHSHNNKKTKKNDGHGHS 272
>U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform a protein.
Length = 519
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 93 HEHRIHSESRAHQHNHRRPRGDDEHAHT 176
H H H S H HN+++ + +D H H+
Sbjct: 204 HGHS-HGGSHGHSHNNKKTKKNDGHGHS 230
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 72 AKKQ*RQHEHRIHSESRAHQHNHRRPRGDDE-HA 170
++KQ +Q + H + +HQ+NH++ G+ HA
Sbjct: 469 SQKQQKQSNGKSHHQHSSHQNNHQKSNGNSNGHA 502
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 111 SESRAHQHNHRRPRGDDEH 167
S S+ H H+H++ R D EH
Sbjct: 112 SSSKHHHHHHKKERKDKEH 130
>AF077534-7|AAK71376.1| 319|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 48
protein.
Length = 319
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +3
Query: 63 VRAAKKQ*RQHE------HRIHSESRAHQHNHRRPRGDDEHAHTVXXXXQRRLQG*RPYL 224
V+ + Q RQH+ ++ H+ + AHQ ++ + + +HAH Q++ Q PY
Sbjct: 18 VQNTESQYRQHQPSYPQNYQNHNYN-AHQQHYHQQQQQQQHAHQQKQASQQQQQQQYPYN 76
Query: 225 PTPAKRCLLTIQ 260
P+ + Q
Sbjct: 77 NYPSPNAIKAYQ 88
>Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical
protein T04C10.1 protein.
Length = 882
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 75 KKQ*RQHEHRIHSESRAHQHNHRRPRGDDEH 167
++Q RQH + S S+ H + RPR D++
Sbjct: 791 QQQQRQHMPQAQSSSQQHLQSRARPRQQDQN 821
>AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kinase
protein.
Length = 882
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 75 KKQ*RQHEHRIHSESRAHQHNHRRPRGDDEH 167
++Q RQH + S S+ H + RPR D++
Sbjct: 791 QQQQRQHMPQAQSSSQQHLQSRARPRQQDQN 821
>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical protein
F55B11.1 protein.
Length = 1358
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 237 WLEWAGKAFILASVSVS*RKRYGHVHHHPVD 145
W +W A++ VS+S +G +HH PVD
Sbjct: 1140 WDDWVKAAYV-DRVSLS-ASGFGIIHHEPVD 1168
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 13 ATVQTVMVTGCSQDAKECVLRRNSNVSMNIEFTPNQEL 126
A V T + G S + EC+ RNS +N Q L
Sbjct: 117 AVVHTKFIGGKSTGSDECLFLRNSRKKVNFHKKSTQNL 154
>U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical
protein C37C3.8a protein.
Length = 302
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 96 EHRIHSESRAHQHNHRRPRGDDEHAHTV 179
+H+I+ E RA +H R D+E H++
Sbjct: 109 DHKINEELRATRHFDLMDRRDEESEHSI 136
>U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical
protein C37C3.8b protein.
Length = 350
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 96 EHRIHSESRAHQHNHRRPRGDDEHAHTV 179
+H+I+ E RA +H R D+E H++
Sbjct: 157 DHKINEELRATRHFDLMDRRDEESEHSI 184
>U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
b protein.
Length = 663
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +3
Query: 30 HGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDDEHAHTVXXXXQRR 200
H R +SRR R+ + R EH+ +S H + R D H RR
Sbjct: 607 HRKRSRSRRRS-RSCSPRDRSREHKKSRKSGRHHRSRSRSSSRDRHRRNRSRSRDRR 662
>U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
a protein.
Length = 749
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +3
Query: 30 HGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDDEHAHTVXXXXQRR 200
H R +SRR R+ + R EH+ +S H + R D H RR
Sbjct: 693 HRKRSRSRRRS-RSCSPRDRSREHKKSRKSGRHHRSRSRSSSRDRHRRNRSRSRDRR 748
>U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
d protein.
Length = 751
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +3
Query: 30 HGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDDEHAHTVXXXXQRR 200
H R +SRR R+ + R EH+ +S H + R D H RR
Sbjct: 695 HRKRSRSRRRS-RSCSPRDRSREHKKSRKSGRHHRSRSRSSSRDRHRRNRSRSRDRR 750
>U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein.
Length = 749
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +3
Query: 30 HGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDDEHAHTVXXXXQRR 200
H R +SRR R+ + R EH+ +S H + R D H RR
Sbjct: 693 HRKRSRSRRRS-RSCSPRDRSREHKKSRKSGRHHRSRSRSSSRDRHRRNRSRSRDRR 748
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 13 ATVQTVMVTGCSQDAKECVLRRNSNVSMNIEFTPNQEL 126
A V T + G S + EC+ RNS +N Q L
Sbjct: 117 AVVHTKFIGGKSTGSDECLFLRNSRKKVNFHKKSTQNL 154
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 63 VRAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDD 161
++AAK + R HQ +H R RGDD
Sbjct: 176 IQAAKNREELPRDPFSDGPRFHQSSHERDRGDD 208
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 63 VRAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDD 161
++AAK + R HQ +H R RGDD
Sbjct: 176 IQAAKNREELPRDPFSDGPRFHQSSHERDRGDD 208
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -2
Query: 239 FGWSGQVRPLSLQASLSARGNGMGMFIITPWTSVVM 132
F SG RP + RG+G+G F++ ++ ++
Sbjct: 5524 FSKSGVCRPFDKDSEGIVRGSGVGCFVLKRYSQALL 5559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,749,121
Number of Sequences: 27780
Number of extensions: 151386
Number of successful extensions: 505
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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