Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P08
         (380 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   0.92 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   8.5  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   8.5  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
 Frame = +1

Query: 112 ELPFEYSALEP---VISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDTI 267
           +LP E     P   ++   I +L    HH+T + N ++ + K          DTI
Sbjct: 291 DLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTI 345


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 273 SGTSTKIQWRWSHQPLYFLEEF 338
           SG   +I + WSH P  F E F
Sbjct: 105 SGLPPEIYYIWSHFPYVFGEAF 126


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 166 NLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDTIIS 273
           NL+  K + TY+N+ N      +++  K +  T +S
Sbjct: 539 NLYAMKMNETYINSGNKISLATSKSFIKANSQTEVS 574


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 157 DIMNLHHSKHHA 192
           D  ++HH+ HHA
Sbjct: 277 DNHHVHHANHHA 288


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 8   VPAGFIISCS 37
           VP GF+ SCS
Sbjct: 189 VPEGFLTSCS 198


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,512
Number of Sequences: 438
Number of extensions: 1893
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)