Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_P07
(347 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 114 2e-26
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 114 2e-26
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 114 2e-26
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 112 6e-26
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 112 6e-26
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 112 6e-26
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 112 6e-26
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 53 5e-08
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 30 0.57
02_01_0043 + 300122-300907,301447-301722,302347-302481 29 1.3
03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873... 27 5.3
11_01_0266 - 2010572-2011879 26 7.1
03_01_0004 + 41829-42203,42376-42474,42699-42743,43604-43741,438... 26 7.1
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 26 9.3
05_03_0682 - 16916437-16916686,16916761-16916822,16917082-169171... 26 9.3
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 114 bits (275), Expect = 2e-26
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +1
Query: 28 MVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 201
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 202 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 324
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 114 bits (275), Expect = 2e-26
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +1
Query: 28 MVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 201
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 202 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 324
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 114 bits (275), Expect = 2e-26
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +1
Query: 28 MVNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 201
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 202 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 324
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 112 bits (270), Expect = 6e-26
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 31 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 204
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 205 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 324
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 90 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 112 bits (270), Expect = 6e-26
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 31 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 204
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 205 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 324
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 90 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 112 bits (270), Expect = 6e-26
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 31 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 204
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 29 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 88
Query: 205 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 324
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 89 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 112 bits (270), Expect = 6e-26
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 31 VNVPKQRRTYXXXXX--XXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 204
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 205 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 324
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 90 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 53.2 bits (122), Expect = 5e-08
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 223 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 324
IVL+L+C CK SQ +KRCKHF++GGDKK KG
Sbjct: 25 IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>03_04_0161 +
17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 29.9 bits (64), Expect = 0.57
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 142 RRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 288
+ + + QG GG S +F ++LE ADC + +V RCK
Sbjct: 207 KELEGRLQGIGGFSNCLFTFLFAGVSMDEVKLEQADCDMDERVYCDRCK 255
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 326 CPFLFLSPPSSKCLQRFRATCDLTLQSAH 240
CP F SPPSS C F ++ DL H
Sbjct: 45 CPLGFTSPPSSSCPLGFTSSYDLDAAFHH 73
>03_05_0001 - 19386264-19386284,19386446-19386517,19386614-19387357,
19387454-19388884,19388953-19389118,19392035-19392114,
19392393-19392462,19392550-19392761,19392837-19392890,
19393471-19393623,19393715-19393930,19394029-19394248,
19394332-19394399,19394510-19394643,19394755-19394854,
19394943-19395421,19395506-19395699,19396270-19396355,
19396364-19396444,19396842-19397023,19397305-19397346,
19398247-19398558,19399374-19399434,19399435-19399617,
19399744-19399863,19400380-19401051,19402597-19402668,
19402742-19402865,19403563-19403651,19405023-19405097
Length = 2170
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 346 QLRTGSFVPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEV 227
Q G PS+S H + + P + P S+H+ D V
Sbjct: 1546 QFSRGLNTPSASIGHTRRDTFRQRKPNTSRPPSMHVDDYV 1585
>11_01_0266 - 2010572-2011879
Length = 435
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 97 SQYKKSKERHAAQGRRRYDR 156
S+ +K+++RH A+G+ YD+
Sbjct: 3 SEKRKTRDRHGARGKASYDK 22
>03_01_0004 +
41829-42203,42376-42474,42699-42743,43604-43741,
43852-44157,44779-45689,45826-46093
Length = 713
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 241 CADCKVRSQVALKRCKHFELGGDKKRKGQ 327
C CK + RC + GDKKR GQ
Sbjct: 93 CESCKAMCKANDCRCDSWVFCGDKKRCGQ 121
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +1
Query: 40 PKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSK 186
P + R Y + K RH+A+ + RY R+ Q Y + K
Sbjct: 250 PHREREYSRMIGDAWNRLAADDKMVYYRHSAEDKERYKREMQEYNERLK 298
>05_03_0682 -
16916437-16916686,16916761-16916822,16917082-16917147,
16917606-16917737,16917925-16918026,16918146-16918343,
16918409-16918555,16918804-16918914,16919661-16920194,
16920269-16920425,16920511-16920660,16920744-16920883,
16921668-16921784,16922759-16922932,16923020-16923187,
16923323-16923464,16923610-16923728,16924997-16925098,
16925618-16925701,16926843-16927142
Length = 1084
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 189 HLQKEGKNYKENCTSSGM 242
HL K K++KENC S G+
Sbjct: 278 HLPKIQKDHKENCCSCGL 295
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,628,032
Number of Sequences: 37544
Number of extensions: 149940
Number of successful extensions: 452
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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