Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P06
         (222 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54TT1 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_UPI0000DC0C8F Cluster: UPI0000DC0C8F related cluster; n...    31   3.8  
UniRef50_Q5KGP5 Cluster: Putative uncharacterized protein; n=2; ...    31   6.7  
UniRef50_A6LMY2 Cluster: Cobyrinic acid a,c-diamide synthase; n=...    30   8.8  
UniRef50_A2U350 Cluster: Putative uncharacterized protein; n=2; ...    30   8.8  

>UniRef50_Q54TT1 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 226

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +3

Query: 57  LYFKWRKRKFHSFSIGHKILLLNVPTTSLAWNSYNYILIVRLYTLPLNAIH 209
           L  K+ K+ FHS  I ++ +  N+    + +N +  IL   L +LP+  I+
Sbjct: 131 LILKFEKKNFHSIIINNENIFSNIHLNPIKFNFFKSILNYLLNSLPIGIIN 181


>UniRef50_UPI0000DC0C8F Cluster: UPI0000DC0C8F related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC0C8F UniRef100 entry -
           Rattus norvegicus
          Length = 132

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +3

Query: 54  CLYFKWRKRKFHSFSIGHKILLLNVPTTSLAWNSYNYILI 173
           CL + W KR  H   +   I LLN    SLAW  Y Y L+
Sbjct: 32  CLLWLWTKRAPH---LRTSIFLLNCKLPSLAWWHYGYTLL 68


>UniRef50_Q5KGP5 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 709

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 1   RHEVTL*INKKIHEPRISAFILNGGNVNSTVSLLGIKFYYLMCLRLHSH 147
           R  V+  + +++H P  +  + +G     T +LLG    + +CLR H H
Sbjct: 3   RKNVSRAVGQRLHLPSSNPSLSSGTRTTRTTNLLGATQTFPLCLRHHIH 51


>UniRef50_A6LMY2 Cluster: Cobyrinic acid a,c-diamide synthase; n=1;
           Thermosipho melanesiensis BI429|Rep: Cobyrinic acid
           a,c-diamide synthase - Thermosipho melanesiensis BI429
          Length = 276

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 96  SIGHKILLLNVPTTSLAWNSYNYILIVRLYTLPLNAIHLITN 221
           S  H +++     TSL  NSY ++ I+    +P N IHL+ N
Sbjct: 144 SANHTLVITTTQPTSLV-NSYTFVKILIHKGIPANNIHLVGN 184


>UniRef50_A2U350 Cluster: Putative uncharacterized protein; n=2;
           Flavobacteriaceae|Rep: Putative uncharacterized protein
           - Polaribacter dokdonensis MED152
          Length = 371

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 57  LYFKWRKRKFHSFSIGH-KILLLNVPTTSLAWNSYNYILIVRLYTLPLNAIHLI 215
           +YFK+++ KFH +   H K   L        W+S     I R+Y L + + H++
Sbjct: 4   IYFKYKESKFHKYVRTHKKYAPLLFFIAGFTWDSLTLGRIDRMYDLVVLSSHMV 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,095,078
Number of Sequences: 1657284
Number of extensions: 3529419
Number of successful extensions: 8013
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8013
length of database: 575,637,011
effective HSP length: 52
effective length of database: 489,458,243
effective search space used: 10278623103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)